Onychostruthus taczanowskii (white-rumped snowfinch): 121333655
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Entry
121333655 CDS
T07590
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otc03036
]
121333655 (SHOC1)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121333655 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
121333655
NCBI-ProteinID:
XP_041256130
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MFAALKYHSTDYLYESMARQKFSIWKLSLCFPPCLHQDEKYHFNGLFADDKYRKPWTRIG
STQNMMAISVLDQWKKSSPVEDFLEKKPISSVEFQTSNDLIEVIPSSNPCSQIDTEESFL
LMKNGFKEDSTQDKYFKIYYAAEFKESQQDLCLEEEFVFIDNLEHFCKKLPTLSVLQSRL
QFFLVKDPLLDSEGQFLTAENIFRECLTFQNGVKMEESQNELQGIEESFCTVSLKDEEYF
LLPVDLEFGKPNNGRSDCVKIPSYLQLKEVLNLAPVTVGDEDLCKQVIGEDLKAKITNKI
EISKYCTIPQEVCSSISTSMLEFCASAEYIPYLKDEMEVPLTPPCRQQRSWVNFLCRGLQ
EEPISLSGNSILIAEPSREFLESLIWQSEKYRDNMSSLLLVERPAVSLAHQHHSLRELQK
MMPLEVEAPMLGSLEEGWLLHRGLHPAVVEILEQFNMDGSNANSLLPTEVETFTQFTSYQ
LERWLEEKNSVTNQELLSAGRHQSEKVVNPDLSLQIQRQNFALSGLSPAKIHSTSTSVAE
LTGGSISKIKTEEAIFFLNQEKKTLKPSESDSCKDVSSKLDKSSCSGKSASLALVSKWAN
DDSDLNNFIMMRSKYTVIQREEKHYVDRPEKVIQPEEQHMSVLKEDDSFCETLKTEEKNQ
ENKDSITVNIQPSESQCQAYCLLEEAAIPVLKDLTHLDILASVTWSFDSVKFDHTRFFLK
QQEKVICDNFKQGKIDEKEIMLFRHAALVHLLVTVRDLLLTCGLDTALGYLSKAKDFYKN
ILESCLNNIWRQLKIVQYSSQKKHETNPKVTSLQCEMLNWMKSCGEKHSVKILIITRMDS
EREKAAFIHPLSRIEGLKTVDLNSEKKGSPLSCKEIISNLSRYSCIIVHNQQIGADFPWT
HFSLVMEYDYSENSGWKNLCKNLNVTYMTFKTTLPEIIQMGNHGGSFLLEVQIPYVFLTT
EGLINMPDILQLFESKYSITFVERSSSCSLRLFGSTDRCVVLTIDECTAIFLQSVEELNY
EDSCDTVISRLVALSLQYMCCWIIFYSRERLSLEYSLKGNTLLNLVLIYATLIELTQKSE
DFEVKVVLTPGIEEAALVIRQIADNGLIASNVSPHEWLDKSWLSVLPSEPEKCLLTFPCI
NPLVAQFMLKKGSSLNRLFLASFDQLQELLPQAPKKILKHFSDIVSSYSLNTAAPLEKTV
TGASHTENQNNFNTSYLDKKQNCQILELPGTSLMNSEALIPPLNLHKSFLKSDLPSCMQK
NACSSDVITRRKLDFSAVSKDCEDFAHLEVKNSLHIKRQPFRMHDSSDHASKDSEKEDFF
AAFSDCAPQESSRSFLDEFRDTTFKSLKIQTDQPLWNEGPSSTGPRNSFVQDGFLSDFFN
DMDELPNLNFSQIGETSKGKRKQRPSFLWTKEKIKTDSGFSEVQAFKKRRLTYERVPGRR
DGQTRLKFF
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctttgaagtatcactcaacagactatttatatgagagcatggcaaggcag
aagttttccatctggaaattatcactttgctttcctccctgtttacatcaagatgaaaag
tatcatttcaatggactctttgctgatgataagtataggaagccatggactagaattggt
tcaacacagaacatgatggctatttcagtattggatcaatggaagaaaagttcacctgtg
gaggatttcttggaaaagaaacctatctcctctgtagagtttcagactagtaatgattta
atagaagttattccaagttcaaatccttgctctcagattgacacagaagaatctttttta
cttatgaagaatggttttaaggaagactccacccaagacaaatatttcaagatttactat
gctgctgaatttaaagaatcacagcaagatttatgtttggaagaggagtttgtttttatt
gataatcttgaacatttttgtaaaaaattgccaactttatctgtacttcagagcagacta
cagttttttttagtgaaagatccccttttggattctgaaggacagtttttaacagcagag
aatattttcagagaatgtttgactttccaaaatggagtgaagatggaagagagtcaaaat
gaattgcagggaattgaagagagtttctgtactgtatctctgaaagacgaagagtatttc
ctgttgcctgttgatttagaattcggcaaacctaacaatggcagatctgattgtgttaag
attccatcatacttgcagctaaaggaggtgttaaatttagctccagtcactgtaggtgat
gaagacctttgcaaacaagtgatcggagaagatctcaaagcaaaaattacaaacaaaata
gaaatttccaagtattgtaccattccacaagaggtttgctccagtattagcacaagtatg
ttggaattctgtgcatcagctgaatatattccatatttgaaagatgaaatggaagtgcct
ttaactcctccatgcagacagcaaagatcatgggttaattttctgtgcagaggacttcaa
gaagaacctatttcactctctggtaacagtattttgattgcagagccctctagggaattc
ttagaatctttgatatggcaatcagagaagtatcgggataatatgagctctcttttgctt
gtcgagcgtccagctgttagccttgcacatcagcatcattcactgagagaactgcagaaa
atgatgccacttgaggttgaagcaccaatgcttggctcactagaggagggctggttgctt
cataggggtttacatccagcagttgtagaaattttggaacaattcaatatggatggaagt
aatgcaaacagtctgcttcctacagaagtagaaacattcacacaatttacatcatatcaa
ttagaaagatggcttgaggagaagaattctgtgacaaaccaagagctgctttctgctgga
agacatcagtcagagaaagtagttaatcctgacttgtcactgcagattcaaaggcagaac
tttgccctgagtggtctgtcacctgccaaaattcacagtacaagtacatctgtggcagag
cttactggaggaagcataagcaagattaagacagaagaggcaattttcttcttaaaccaa
gaaaagaaaaccctcaaaccatctgaatcagacagctgtaaagatgtgtcttctaaacta
gacaaatcatcctgcagtggaaagtctgcatcacttgcactcgtttctaaatgggccaac
gatgattctgatctgaacaactttattatgatgagatctaaatatacagtcatccaaaga
gaggaaaaacattatgtagatagacctgaaaaagtgatacagcctgaagagcagcatatg
agtgttctcaaagaggatgattctttttgtgagactctaaaaacagaggaaaaaaaccaa
gagaataaagacagtatcactgtcaatattcaaccatcagaaagccaatgccaggcatac
tgcctcttggaagaagcagctattcctgtactaaaagatttgacacacctggatatactt
gcttctgttacttggagctttgacagtgttaaatttgatcacacaaggtttttcttaaaa
cagcaagagaaagtgatatgtgataattttaaacaaggtaaaatagatgagaaggagatc
atgctattcagacatgctgctctggtacacctgctggtgacagttcgagatctgctgcta
acatgtggcttggatacagctctaggttatttgtccaaggcaaaggatttctataaaaac
attttagaatcctgtttgaataatatctggaggcagctgaagattgtacagtacagcagc
cagaaaaagcatgaaacaaatcccaaagtaacatcacttcagtgtgaaatgttaaattgg
atgaaaagttgtggagagaaacacagtgttaagatactaatcattacaaggatggactct
gaaagagaaaaagctgccttcattcacccattgtctaggatagaaggtttgaaaactgtg
gatttgaattctgagaaaaaaggaagccctttaagttgtaaagagatcataagcaatctt
agtaggtattcctgcattattgtacataaccagcaaattggagctgacttcccttggacg
cacttctcactagtaatggaatacgattattctgaaaattctggctggaaaaatctgtgc
aaaaatctgaatgttacttacatgacttttaaaaccaccctccctgaaataatacaaatg
gggaatcatggtggttcctttcttctggaagtacagattccatatgtattcctgacaact
gaaggtcttattaatatgccagatattcttcagctttttgaatccaagtacagcattacc
tttgttgaaagaagcagcagttgctccttaaggctctttggaagtacagatcgatgtgtt
gtgctgacaatagatgagtgcactgctatctttctgcagagtgtcgaagaactaaattat
gaggactcctgtgacactgtaatatcaaggctggtggcattatcactccaatatatgtgc
tgttggattattttctattccagagaaagactgagtttagagtacagtctcaagggtaat
actctgcttaaccttgtcttaatttatgccactctaattgaacttacacagaagtcagaa
gactttgaagtaaaggtagttcttacgccagggattgaagaggcagcgctggtaatccgt
cagattgctgataacggcttgatagcatctaatgtcagtcctcatgagtggctggacaaa
tcctggctttctgtcttgccatctgagccagagaaatgcctgcttacttttccatgtatc
aatcctttggttgctcagtttatgctaaagaagggatcttcactgaacaggttatttctt
gcaagctttgatcaactccaggaacttctgccacaggctccaaaaaaaattttaaagcat
ttcagtgacatagtatcttcatacagcctaaatactgctgctcctctagaaaaaacagtg
acaggtgcatcacacacagaaaaccagaataacttcaacacatcgtatcttgataaaaaa
caaaattgtcagattttagagctaccaggaacatctcttatgaattctgaagccctaatt
cctccactgaatcttcataagagttttttaaagtctgatcttccaagttgtatgcaaaag
aacgcatgctcctcagacgtaattacaaggagaaagctggatttctctgctgtatcaaag
gactgtgaagattttgctcatctagaagttaaaaattctctccatattaaaagacagcct
ttcagaatgcatgatagctctgatcatgcttccaaagactctgaaaaagaggatttcttc
gcagctttcagtgactgcgcacctcaggagagctctaggagttttctagatgaatttaga
gacacaacatttaaaagcctaaaaattcagactgaccagcccctgtggaatgaggggcct
tcatccactggcccacgtaactcatttgttcaagatggttttctctctgatttctttaat
gatatggatgagcttccaaatctgaattttagccaaataggtgaaacatctaaaggaaag
agaaaacaaagaccttcattcttatggacaaaagaaaaaattaaaacagattcaggattt
tcagaagtacaggcattcaaaaaaaggagattgacatatgaaagagtccctggaagaaga
gatggacaaacacgtcttaaattcttttga
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