Onychostruthus taczanowskii (white-rumped snowfinch): 121334087
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Entry
121334087 CDS
T07590
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121334087 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121334087 (SF3B3)
03041 Spliceosome [BR:
otc03041
]
121334087 (SF3B3)
03036 Chromosome and associated proteins [BR:
otc03036
]
121334087 (SF3B3)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121334087 (SF3B3)
Spliceosome [BR:
otc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
121334087 (SF3B3)
Complex B
121334087 (SF3B3)
Complex C
U2 SnRNP specific factors
121334087 (SF3B3)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
121334087 (SF3B3)
TFTC complex
121334087 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
121334087
NCBI-ProteinID:
XP_041256923
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctaacgttgcagcgtgccacaggcattagctttgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggagctg
ctccgccctgaccccaacacggggaaggtccacaccctgctgaccgtggaggtgttcgga
gtcatccggtccctcatggccttcaggctgaccgggggcaccaaggactacatcgtggtg
ggcagcgactcgggccgcattgtcatcctggagtaccagccctccaagaacgtcttcgag
aagatccaccaggaaaccttcggcaagagcggctgtcgcagaatcgtcccgggccagtac
ttggccgtggacccaaagggccgcgccgtcatgatcagtgccattgaaaagcagaagctg
gtgtatatcctgaacagggatgctgctgctcgactcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtggggtttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggtgaagct
gcagccaacacacagcagacattgacgttttatgaattggacttgggtttgaaccatgtt
gtcaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttcctggt
ggttctgatggccccagtggggtgctgatctgttctgaaaactatattacttataaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagaggggtatgatctttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt
gtgctgaaaacaggatttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggggatgatgatgaggagccagagttttcttctgccatgcctcttgag
gaaggagacacattcttttttcagcctcgacctctgaagaacctggtgttggtggatgag
ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca
ccccagttgtatgtggcttgtggtcgtgggcccaggtcatccctgagggttttaagacat
ggacttgaggtatctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctacattattgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaagaagtgacagactctggattcctg
ggtactacaccgaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatccgagcagataaaagagtaaatgaatggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga
aaggagatgtcggccgacgtcgtttgcatgagcctggccaatgttccccctggggagcag
cgttcccgcttccttgctgttggactggtggacaacactgtcagaatcatttcacttgac
ccttcggattgtttgcagcccctgagtatgcaggcactgcctgcacagcccgagtcgctg
tgcatcgtggagatgggtggcacagagaagcaggatgagctgggagagaggggctccatt
ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcgaaccgtcctggac
cctgtcaccggcgatctgtccgacaccaggaccagatacctcggctcgcggcctgtcaag
ctcttccgcgtgcggatgcaaggccaggaggcggtgctggccatgtcgagccgttcctgg
cttagttattcctatcaatcccgcttccacctgactcccctgtcttacgagacactggag
tttgcatctggttttgcttctgagcagtgccctgagggcattgtggccatctccacaaac
acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttccca
ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacttgatcatcatc
gagacagaccacaatgcttacactgaggccaccaaagcacagaggaagcagcaaatggct
gaggaaatggtggaggctgcgggtgaggatgagagggagctggctgcagagatggctgca
gcctttctgaacgagaatcttcctgagtccatctttggtgctcccaaggcagggaatggt
cagtgggcctctgttatcagagtgatgaaccccatccagggaaatacattagatctggtt
cagctggagcagaatgaagctgctttcagcgtggctgtgtgccggttctccaacactggt
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcagtt
gctggggggtttgtctacacatacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggtcgcgtctta
attggagttgggaagctcctgcgtgtgtatgacctgggcaagaagaaactgcttcggaaa
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg
attgtttcagatgttcaggagagtttcatctgggtgcgttacaaaaggaatgagaaccag
ctcattatctttgctgatgacacttacccccggtgggtcactacagcaacactcctggat
tacgacactgtggctggagcagacaagtttggtaacatctgtgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggc
ctgcttaatggagcatcacagaaggctgaagtgattatgaattatcacgtgggagaaacg
gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtttatacc
accttatcaggggggataggaatcttggtcccttttacttcccatgaggatcacgacttc
ttccagcatgtggaaatgcacttacggtctgagcaccctcctctctgtggacgagaccat
ctcagtttccgctcctactacttcccagtgaagaacgtgattgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggccgaggagctggaccggacc
ccacccgaggtgtccaagaagctggaggacatccgcacgcgctacgctttctga
DBGET
integrated database retrieval system
