Onychostruthus taczanowskii (white-rumped snowfinch): 121334342
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Entry
121334342 CDS
T07590
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otc03019
]
121334342 (TNRC6A)
03036 Chromosome and associated proteins [BR:
otc03036
]
121334342 (TNRC6A)
Messenger RNA biogenesis [BR:
otc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121334342 (TNRC6A)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121334342 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
121334342
NCBI-ProteinID:
XP_041257306
LinkDB
All DBs
Position
Unknown
AA seq
1916 aa
AA seq
DB search
METNTTFCCRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKK
KKEAAQKKAIEQKIKVPEQTKTSVSQPQPVASNGTSTGTSTPNNAKRAPASSQQQPSPRY
PPREVPPRFRHQEQKQLLKRGQQLPGIAANLGSAPKVLNGQPGGSAGTHNQPLSNGEVPN
SSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSD
KEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMASGSTAGEGDGIRNGLGHGSQNKF
VVGSNSNNVGNGSINGPWGLSHGSIISTCQVSVDAPDSKSESSNNRMNAWGTISSSSNGG
LNPSTLNSNGSHGAWSVLENSGHALKGSVGSGSPGTSIQCSTIGQMANSQSINSKVGGSA
HGSWGSLQESCDSEVNGTRNVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQMNEL
PNTAGPGAWRVSTMNHSQIQASPVANGTSISHLSNGEAKTGGSYGTTWGAYGSSYSGDKC
PGPNSQANGDTVNATLMQPGGSGPGSTNFQINGSKGGGVWEAGTVGSQNVPWGNGSGAGA
GGSRRGWGSPAQNAGTNISNGEWSKLPSGQHSNEGVNGNSRKFTNGWKSAEEEELNSQSS
AASQMAEQSSTWAKTGTGDSEGSSESAGCHEDRAATEGQNRERRKVDQHTLLQSIVNRTD
LDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPSP
NNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWND
TPKMKQGWGDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSSSGGSNSDRSVSGWNEPGK
SNSVTWGGNNATPNSSSGWDEPAKSNQSQGWGDPPKSNQPQVWGDSSKPVNSPEWNKQDV
GSWGAQSGTSKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSK
YNYKNVNMWNKNVPNSSSSSDQQAQVHPQLLSSSAMSSKESSSGSGWGEPSAPATTVDNG
TAAWGKPMDTGTSWGEPVSEAGGTSGWGNASLGQQPPNKPGPKSMQDSWCGDDMPLSGSR
QTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGMMKGGNKQDETWINPFIKQF
TNLSFSRESPEETIQSNKMDMSGGLLQDKRLEMDKHGLGVGDYNRVVGKGPGSRPQIPKE
SSMDRGPYFDKNGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPV
SLLKYAPNSGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQPQRSVPSGGR
QQQEQQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPSMKSFLENVMPHTTPE
LQKGPSPINAFSSFPIGFCPISTSEIPGMNSNLNVNLDMSSIKEPQSRLRKWTTVDSISM
NTSLDQNSSKHGAISSGFRLEDSPFVPYDFLNSSNSPASPPGSIGDGWPRAKSPNGSSSV
NWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTT
LPSTSAWSSIRASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPK
SITAPSRPPPGLTGQKPPLSTWDNSLRLGGGWGSSDARYTPGSSWGESSSGRITNWLVLK
NLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTI
LAEFASEEEISRFFAQGQSLTPSPGWQSLGSSQSRLGSIDGSHSFSNRNDLNHWNGAGLS
GTSSGDLHGTSLWGSPNYSTSLWGAPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaataccactttctgttgcagagaattggaagctaaagctaccaaagaagtc
gaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagacaagaag
aagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaacaaacc
aagaccagtgtaagccagccgcagcccgtcgcctccaacggcacttccacaggaaccagc
actcctaataatgccaagcgggccccagccagcagccagcagcagccctcgcctcggtac
cctccccgggaagtaccaccgcgattccggcaccaggaacagaaacagcttctgaagcgc
gggcagcagttgcctgggatagctgccaacctgggatccgcccccaaggtgctgaacggc
cagccaggaggcagcgctggcacccataaccagcccctgagcaacggagaagtgcccaac
agcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcccctaac
cagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactggggacca
gtctcttcaaatagcgactccagcacaaactgggataaagttatcgtagacggctctgac
aaagaagcatggccatcaatcactggcagtgacccagagctgacttcagaatgtatggac
actgactctgcctccagctctgggtcggagcggaacctcgttatcatggcttcagggagc
acagcaggagaaggcgatggcattcgcaacggcctcggacatgggtctcagaataagttt
gtggttggtagcaacagcaataatgtgggcaatggaagtattaatgggccgtgggggttg
tcccacgggtccataataagcacatgtcaagtttctgtggatgctcctgacagcaaatct
gaaagtagcaacaatagaatgaatgcttggggcaccataagctcttcatcaaatggaggg
ttaaatccaagcactttgaattcaaatggcagccatggtgcctggtccgtgttggagaac
agtggacatgccctgaaagggtccgtggggagtgggagtcctggcacaagcattcagtgc
agtaccataggtcagatggccaacagccagagtattaactcgaaagtgggtggctcagcc
cacggttcctggggaagccttcaggaaagctgtgattctgaagtaaatggtacaaggaat
gtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataacact
actaactttatgacctctagtttaccaaactctgctggttcggtgcagatgaacgagctg
cccaacaccgcagggcccggggcctggcgcgtgagcacaatgaatcattctcagattcag
gcctctccagtggcaaacggcacttccatctctcacctgagcaacggtgaggccaaaact
ggcggctcttacggtactacctggggtgcctatggttctagttactctggagacaaatgt
ccaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatgcagccgggc
ggcagcgggcctggcagcactaactttcaaatcaacgggagtaaaggcggaggggtgtgg
gaggcagggacggtcggctcccagaacgtgccgtggggaaacgggagcggtgccggtgcc
ggcgggagcagaagaggatggggcagccccgcacaaaacgctggcaccaacatttccaac
ggggaatggagcaaactgcccagcggccagcattccaatgaaggcgtcaatggaaacagc
aggaagtttacaaatggatggaagtctgctgaggaggaggagctcaacagccagagctct
gctgcctcgcagatggctgagcagagcagcacgtgggccaaaacaggtacgggggacagc
gaggggagctcggagagcgccgggtgccacgaggacagagcagctacggagggccagaac
cgagagaggaggaaagtcgaccagcacacgttactccaaagcatagtgaacagaactgac
ctagatccgcgtgtcctttccaactctggttggggacagactccaatcaagcagaacact
gcctgggataccgaaacgtcaccgaggggtgaaagaaaaactgacaatgggacagaggcc
tgggggggctctgtgacacagacttccagctcaggggggtgtgtggatagacctagccct
aataataacgatacctcatctgtatcggggtggggagatccaaagtctgctacaaggtgg
ggagactccaaagggtcaaacagccaaggggggtgggaagaagattctgctgctacagta
atggtcaagagcaatcaatcatggggaagtggcaaagaagaaaagtcatcctggaatgac
acaccgaagatgaagcagggatggggagatggacagaaggccagccagggttgggcagtg
tctgctggtgatagctggggtgaaaactccagaagtaaccactggggtgaggcaaagaaa
tccagttctggaggcagcaacagcgacaggtcggtgtctggttggaacgagccaggtaaa
tcaaattctgttacttggggaggcaacaacgcaaccccaaacagctcttcaggatgggat
gagcctgccaagtctaatcagagccagggctggggagaccctccgaaatccaatcagcct
caagtctggggggactcgtcaaagccagtcaactctcctgagtggaacaaacaagatgtt
ggctcttggggagcccagtctggcacgagcaaacccccggggtccggctggctggggggg
ccaatgccagccccagcaaaggaggaagagcccacgggctgggaggagccatcccccgaa
tccattcgccggaagatggagattgatgatggaacttctgcttggggtgatccgagcaaa
tacaactacaaaaatgtgaatatgtggaataaaaacgtccctaacagtagcagcagttca
gaccagcaagcacaggtacacccgcagctactgtcttcaagtgccatgtctagcaaggag
agcagttcgggttctggttggggagagccttctgctccagccaccactgtagacaacggg
acggcggcgtggggcaagcccatggacactggtacgagctggggagagcctgtcagtgag
gcaggaggcacctctggctggggaaacgcttctcttggccagcagcctccaaacaagcct
gggcctaaatctatgcaagatagttggtgtggagatgacatgcccttgagtggcagtcgt
cagaccagctgggaggaagaggaggatgtggagatcggaatgtggaacagcagttcctca
caagaagctaacccctcgttaaactggccaccctacatgaagaaaatgcccacaaaggga
atgatgaaaggtggaaataagcaagatgaaacatggatcaatccattcattaagcaattc
acaaatctcagtttttcaagagaatcaccagaagaaaccatacagagcaataagatggac
atgtctggagggttactgcaggacaagcggctggagatggacaagcacggcctgggcgtg
ggagattacaatcgtgtggttggaaaaggccctggttctcgtccccaaattcccaaagag
tcttccatggatcgcggtccttacttcgataagaatggcaatcccagtgtgtttggtgtt
gggaatatagcagcacagcccaggagcatgcagcagcctccagcacaacctcttaattca
tctcagcctaatccacgtgctcaagtgcctcctccattactatcccctcaggttccagta
tcattactgaagtatgcaccaaacagcggtggcctgagcccactttttggcccgcaacag
gtagccatgttgaatcaactgtcccagttaaaccagctttcccagatctcccagttacag
cggctgctggctcagcagcagaaggcgcagccccagaggagtgtgccttctgggggtcgg
cagcagcaggagcagcagggtcgatctcttagtatgcagcaacagatgatgcaacagtcc
cgtcagcttgatccaaacctgttaatgaagcagcaaactccaccctctcaacagcagtca
ctccatcagccctccatgaaatccttccttgagaatgtcatgccccacactactcctgag
ctgcagaaagggccctcaccaatcaatgcattcagcagcttccctataggcttctgtcca
atttctacttcagaaattccaggaatgaactcaaacttgaatgtaaacctggatatgagc
agtattaaagagccacaatctcggctgaggaaatggactacagtcgacagcatttctatg
aacacatccttggatcagaactccagcaaacatggtgctatttcaagtggtttcaggctg
gaggattctccgtttgttccttacgactttctgaacagcagtaactccccagccagtcct
cccggctccattggggacggctggccccgtgccaaatcgcctaatggctctagcagtgtt
aactggcccccagagtttcgccctggtgagccatggaaaggttatccaaacatcgacccc
gaaactgacccttacgtcactcctggcagtgtcataaacaatctctcaattaatactgtg
cgggaagttgaccacctcagggacaggaacagtgggtcatcctcatctttgaacaccacg
ctgccttcaactagtgcctggtcatccattcgtgcctccaactacaatgtttccctcagc
agtacagcacaaagcacttcagtagccagaaacagtgattccaaatcaacgtggtctcct
ggatcagtcactaacacctctctggctcatgagctgtggaaggtccctttgccacctaaa
agcatcactgctccatcccggccacctccagggctgacaggccagaaaccacccctgtcc
acctgggacaattccctccgtctgggtggaggatggggaagttctgatgccagatacacc
cctggttcaagctggggtgagagcagctcagggagaataacaaattggcttgttctgaaa
aaccttacacctcagattgatggctcaaccctgcgtactctgtgcatgcagcacggccca
ctaataacattccacctgaacctcccacatggtaatgctttggtccgttacagttcaaaa
gaagaggtagtgaaggcacaaaaatctctgcacatgtgtgttttagggaacactactatt
cttgctgagtttgccagtgaagaggagattagtcgcttctttgcacaaggccagtccctg
actccgtctcctggctggcaatctctgggatccagccagagccgactcggatccatcgat
ggttcccattcgttctcaaaccgtaatgatctaaatcactggaatggtgctgggctgtcg
ggaactagcagtggagaccttcatggcacttcactttgggggagccccaactattccacg
agcctgtggggtgccccgagcagcaatgacaccaggggaattagcagcccgtcccccatc
aacgctttcctttccgttgaccacctgggtggaggtggagagtccatgtaa
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integrated database retrieval system
