Onychostruthus taczanowskii (white-rumped snowfinch): 121334353
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Entry
121334353 CDS
T07590
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otc01002
]
121334353 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otc04121
]
121334353 (USP42)
Enzymes [BR:
otc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121334353 (USP42)
Peptidases and inhibitors [BR:
otc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121334353 (USP42)
Ubiquitin system [BR:
otc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121334353 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121334353
NCBI-ProteinID:
XP_041257351
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPAEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGASSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPSMADPSKTQKITISIHNKLPPRQAVPQAECPSSAVEEEGLKPLPS
ATITNPSAAEPTSNLSTVSVATNASKQEVPDEIFVEPAVNGNPKLCADNMVPYGAEPSGK
SEESKGLFKRHCNVISSNGILLGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLEAMPKALSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDNDGVTDPVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDSEGEFLGQCESEDIRDKEKLRRSKEPELISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGLSNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKPDDHSHRRRSSHSMETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWDKCRYYNDYYSSHGTRDGR
ERRSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSNFEDSSRESEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESRPPDDHLCEQYRTQGSKQPSKEEKPSGAGDSKKYSSMASTEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacgctct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtctgggccgg
gtacctcctgcagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctcgttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcag
caaacacaaagtgttggagttggactgcagaacctcggcaacacttgtttccttaattct
actctccagtgcttgacctacacgcctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagccacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacttctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcagatacgtacgagccattcctcgacgtgactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttccggcatcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagagcccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcatcaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaagacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctacgatctgacgctgggggagcgcgccttctacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggcgccagcagcaagcaggct
gcgttcatgggaccacggcttcctcctcacatgatcaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtactgttggtgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaatttccaggccttcaatggcagaccct
tccaaaacccagaagatcacgatcagtattcacaacaagctgcccccacggcaggcggtg
ccgcaggcggagtgtccgagcagcgctgtggaggaggagggtctgaagccccttccttca
gccacaattacaaacccttctgcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgcctccaagcaggaggttcctgatgagatcttcgttgagccagcagtgaat
ggaaaccctaagctctgtgctgataacatggtcccttacggtgcagagccttcaggaaaa
tccgaggagtcaaagggcttgttcaaaaggcattgcaacgtcatttcttccaatggaatt
ctgcttgggaaggtggtccgtacattgcataattcccattcatcctgtcagaatgctgaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttctgagattttcttctctaaagcaaatggagtgcttgaagcgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacatacagccagttgaacagcttg
tcggaggaaaagagtgtctctggacctcagaaatcttctgacaatgatggagttacggat
cctgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatagtgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagaaaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagac
aaatgccaagatacaaaggacatttctaataactatgtagaggtaccacccgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagacgaggga
ctgagtaataaaatatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaagaactgacaaagagcactaccggaggaagagagaaaactcggacacg
gaggagaaggagaggcaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcatggaaacaaacaagcaaagccgtcacaagcaggagtattgcagtgagagc
aagtacagatcctcccacaacgaaagaaacagtcccagtaatggcaggagctcaggaaaa
tactctcgttacagatcccgaagcagagaaaggacagatccagacaggaataggtattat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaaccacggaga
tgggataaatgcaggtactacaatgattattattcctcccatggaacaagggatggcagg
gagaggaggtcctctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcactgcaaaagcagatgggctcacagcacactctcccgagaggag
gacgtgcatcacttcagcagccacagagcaaacttccaccactgttcagtacctcagcag
cactcggaaaaatattcccgtgagaggcacgcacttccacccgtgtcagctcactcaaac
tttgaggactcttcccgggaaagcgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgcagaaagacagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaacccagggcagtaaacaaccctccaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
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integrated database retrieval system
