Onychostruthus taczanowskii (white-rumped snowfinch): 121334427
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Entry
121334427 CDS
T07590
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121334427 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otc01001
]
121334427 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otc04054
]
121334427 (CIITA)
Enzymes [BR:
otc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121334427 (CIITA)
Protein kinases [BR:
otc01001
]
Serine/threonine kinases: Other
TAF1 family
121334427 (CIITA)
Pattern recognition receptors [BR:
otc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121334427 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
LRR_14
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121334427
NCBI-ProteinID:
XP_041257505
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MQVLTKRQTMDSVFVPENGYLDLLHSDIDPLHLCTFFDPKSSGDEEGDFSTDLEVDASNY
EQLNNMDFPYENGDGFYPCCNTTDAYAKIAELVEYVLKDQQEKQVEDIFAGNLILDDIAA
ENTEKFPDIKMQSCLKRTFLGSAADSYCDASEPKYKKTVEVPAASAGNGSFFAMPLNSHP
VSCTSLTNQHMSCSVPAAHGLERSLIIPGLSEPLTSECLPKENPGLAGPPQQIFNFVLEN
GTSDVIVYPVLTSSMETLMSPNFAVNLCDLEKFQETQDSIIPSEEPFKRPEQVETFCSSL
KDYFRDTCKSVTMEREVNLDHLFIDGTLVQSQTETKTGKNSAKAMEKELVTCNLQEKEKT
AIVRSQIFQIPQHKGLETKVIVVLGKAGMGKSILVQKICQDWSNGEFSQFEFVFWFDCKQ
ISLPEKQYSLKELLLEFFVKPQEGSKEIFEYILQNPDKVLLIFDGFKGLHDHENFPRCSA
SQPEKDLCSIKELLSGLIQKKILNGCTLLLTARPKDRLYQYVSKVDKTIEMVGFSPQQRE
LYITKYFEESLYCDSALKLIRECEYLFSHCYSPVMCRFVCFLCETVLEMGEKSLPSTLTG
VFLKFFQQKIMFMQTDVTTTQNQESLATLARVAWCLGEKHQSAMKSDLIPSKEVKEFALK
YGFFLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCALHLLLAEELKDKNLTKYLSFLSKKK
KPYNWLDLMPRFLAGLMFLQDDPYFCSLSKEVEKQSTKKQKTLLKYIRRLQINSLCPERL
LELLCCVYETQNNYLLQHVALRLEPDLSFLGIVLTPPDVHVLHSILKRSRKEFSLDLRNS
SIDMQGLQALVSLRNVTSFRASLSDTVRLWKSLEQTKDYELLKVSTEKFVLDPFKAKTMK
DISDLSDLVEMQEKMMNCMQEASGCTSYEIPAIRNLRKVEFALGPACGLQGLLKLVKILA
AFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDLGAENLAAALPS
LSSLKTLSLYNNSICDFGAENLAKVLPAMKSLRVLDVQYNKITGVGAQQLTDSLRKCPHI
KNLVMWNPTIPYGVLEHLHQLDSRISV
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcttgacaaagagacaaaccatggattcagtatttgtgcctgaaaatggctac
cttgatttactgcacagtgatattgacccattgcatctgtgtactttctttgatcctaag
tcgtctggagatgaagaaggtgacttctctacagatcttgaagttgatgccagcaactat
gaacagttaaataatatggatttcccatatgaaaatggggatgggttctacccctgttgc
aacaccacggatgcttatgctaaaatagctgaattagtagaatatgtgctcaaggatcag
caggagaagcaggttgaagacatttttgcagggaaccttattttggatgacattgctgct
gaaaacactgagaaatttcctgacataaagatgcagtcatgtcttaaacgaactttctta
ggctctgcagcagacagttactgtgatgcttcagaacccaaatataagaaaactgtggaa
gtccctgcagcttctgcagggaatggcagtttctttgctatgcctctcaacagccaccca
gtgagctgcacctccctaactaaccagcacatgtcctgttctgttcctgctgcccatggg
ctggaaagaagcctcataattcctggattgtcagaacctttgacctcagagtgcctacca
aaagagaatccaggcttggcaggtcctcctcagcagatatttaactttgttcttgaaaat
ggcacatctgatgttatagtatatccagtgctgacatcttccatggaaacattaatgtct
ccaaattttgcagttaatttatgtgatttagagaaatttcaagaaactcaagattctata
attccttctgaagaaccttttaaaagaccagagcaagtggaaactttctgttcatccctt
aaggattatttccgagacacgtgcaaatctgtgaccatggagcgggaagtaaatctggat
cacctcttcattgatgggacacttgttcaaagtcaaactgaaaccaaaactggaaagaat
agtgcaaaagcaatggaaaaggagctggtaacctgcaacctgcaagagaaggaaaagaca
gccattgttagaagccaaatatttcaaatcccacagcataaaggcttagagactaaagtg
attgtggtgctgggaaaagcaggaatgggcaaaagcattctcgttcagaagatctgccag
gactggtccaatggagagttttctcagtttgaatttgtattttggtttgactgcaaacaa
ataagcttgcctgagaagcaatacagtctcaaggaactgctgcttgaattttttgtaaaa
cctcaagagggaagcaaagagatctttgagtatatcttgcaaaatcctgataaagtcctt
ctgatttttgatggttttaaagggttgcacgatcacgagaattttcctcgttgctcagcc
agccagcctgaaaaggatttgtgcagtataaaggagctgctttcaggactcatccaaaaa
aagatactcaatggctgtactttattacttacagcaagaccaaaagacagactctaccag
tacgtgtccaaagtggataagactattgaaatggtaggattttcccctcagcagagagaa
ttgtacataaccaaatactttgaagaatcgctgtactgtgatagtgcactgaaattaatc
agagagtgtgagtacttgttcagtcattgttacagccctgttatgtgtaggtttgtttgt
tttctctgtgagacagtgcttgaaatgggagagaaaagccttccttcaactcttactgga
gtcttcctgaaattttttcagcagaagataatgtttatgcaaacagatgttacaaccaca
caaaatcaagagagtcttgctaccctagctcgtgtagcctggtgtcttggagaaaagcac
caaagcgccatgaaaagtgatcttattccttctaaggaagttaaagagtttgctctgaag
tatgggtttttcctgccatttgcattccccagacattcagatagcgaagaagaggaattt
gggagcacattctctgattttgtcattcagaatttcttgtgtgcacttcaccttttgtta
gcagaagagctcaaggataaaaatctaacaaagtacctgtcttttctatccaagaagaaa
aaaccttataactggttagatttaatgcctcgatttttggctggtttgatgtttctccag
gatgacccctacttctgctctctttcaaaggaggttgaaaaacaatcaaccaagaagcag
aagacactcttgaaatacatcagaaggctgcagattaatagtctctgtccagagaggttg
ctggagctgttatgttgtgtttatgaaacacagaacaattatcttctgcagcatgtggcc
ttaagacttgagccagatttgtcttttctgggcatagttcttacaccacctgatgtccat
gtactgcactctattttgaaaaggtcaagaaaagagttttccttggatttacggaacagc
agcattgacatgcaagggctgcaagccttggtcagcctaaggaatgtgacatcgttcagg
gcttctctcagtgacacagtcaggctctggaaatctttagaacaaacaaaagactacgaa
ctgctgaaagtgtccacagagaaatttgttcttgatccctttaaggccaagacaatgaag
gacatcagtgacctctccgaccttgtagagatgcaggagaagatgatgaattgtatgcaa
gaagcatctggttgcaccagctatgaaattcctgccatcagaaacctcagaaaagtcgaa
tttgcactgggtccagcatgtggccttcaaggattgctaaaactcgtgaaaattcttgca
gcatttccatcacttcagcatttagaccttgatgctctgagtgaaaatggcataggagat
gaaggagcaaagagtctgtctgaagtgtttccaaccctgacatcactggaaacattaaat
ttgtcacagaataaaataacagacctgggtgcagagaacctcgctgcagctctcccttcc
ttgtcttccttaaaaacactaagcttgtacaataacagcatttgtgattttggagcagaa
aatctggcaaaggttcttcctgcaatgaaatctttaagagtgctagatgttcagtataac
aaaataactggtgttggagcccagcagctgactgacagcctacgcaaatgtccccatata
aagaacctggtgatgtggaatcccaccattccctatggagttcttgaacaccttcaccag
ctggactccaggatcagtgtgtag
DBGET
integrated database retrieval system
