Onychostruthus taczanowskii (white-rumped snowfinch): 121334778
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Entry
121334778 CDS
T07590
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otc03009
]
121334778 (IGHMBP2)
03012 Translation factors [BR:
otc03012
]
121334778 (IGHMBP2)
Enzymes [BR:
otc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121334778 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
121334778 (IGHMBP2)
Ribosome biogenesis [BR:
otc03009
]
Eukaryotic type
Other ribosome biogenesis factors
121334778 (IGHMBP2)
Translation factors [BR:
otc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121334778 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
Helicase_RecD
ResIII
nSTAND3
AAA_16
DEAD
AAA_22
SLFN-g3_helicase
AAA_25
Flavi_DEAD
UvrD-helicase
IstB_IS21
T2SSE
ABC_tran
AAA
DAP3
PhoH
NTPase_1
Glyco_transf_21
UvrD_C_2
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
121334778
NCBI-ProteinID:
XP_041258159
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MAAEAAERHLGLLRDEREAELAQSRAWQESVSLKELQRRGVCLLKLQVSSQRTGLYGRLL
VTFQPRKRDSDTELPSNSFGPGDIVGLYESAGQGDPLCTGVVTRVTPKAVTVALEEPRDG
ELAVDHERSFRLLKLANDVTYNRLKRALTALKQYRGGPASDLIDVLFFASAPRAFPETKP
LEFFNASLDESQREAVSFSLAQRELAIIHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPS
NVAVDNLVERLAGCRARLLRLGHPARLLQPIQQHSLDAVLARGDNAHVVADIRRDIDRAW
AKTKKAQDKGERSHFLGEIKTLRKELKEREEAAMAAALSQASVVLATNTGASSDGPLKLL
PETHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHRAAAEGLSLSLME
RLAGHYGERAVRMLTVQYRMHRHIMEWASAELYGGRLSAHPSVAQHLLRDLPGVSDTEET
SIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLVGMHVQALVDAGVKAKDIAVVAPYNLQ
VDMLRQHLCHSHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEERRINVAVTRA
RRQVAVVCDSHTVGSRPFLRRLLDHLSQHGLVRSAFEYLDDLVPQNYPGEGGAQRQQGPK
APGPKARPAPAGKLKAAAAGAGSQKPGARSSPSAAAAGRDASGSKEGGDRFRAMLVAFLA
SSEAQLDFPTSLNSHERMLVHVLAEEYGLQHLSSGEGQDRYISVRKRLPKQPPLPSQPLP
EPLPEPLPEPQHPHGNIPDPAEPGESGEGSGKVDLKSLHLERVQREKARREEAARKVQEP
KSGKRKKEKSEAKGKPAIGSAAGEDFDALISAAMEADRTCGFPRCKASVTTLGQLCHHCQ
RLFCLSHHIPEVHGCGEKAKAQARQRISREGILYPGSGSKDKSLDPARRAHLQRRLDQKL
NLSCPSHRAPWRLIPTGKAHTDSNQVSFAGGRDPGVHPGHFPNTSHRVHLSHPQNSSSSI
FLSPG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaggcggcggagcggcacctggggctgctgcgggacgagcgggaggccgag
ctggcccagagcagggcatggcaggagagcgtctccctgaaggaattgcagcggagaggt
gtctgcttgctcaagctccaggtcagcagccagagaaccggcctctacgggcgtctcctc
gtgacattccagcccaggaagcgggactcggacaccgagctgccctccaacagctttggg
cctggggacatcgtggggctctatgagtcggccgggcagggggacccgctgtgcacgggc
gtggtgacacgtgtcacccccaaggcagtgacagtggccctggaggagccccgggatggg
gagctggccgtggaccacgagcgctccttccgcctgctcaagctggccaacgatgtcacc
tacaacaggctcaaaagagctctaactgcactcaagcagtaccggggtggcccagcctcc
gacctgatcgacgtcctcttctttgcctctgctcccagggcgttccctgaaacaaagcct
ctggagttcttcaatgcctccctggatgagtctcagagggaagctgtgtccttctccctg
gctcagagggagctggccatcatccacgggcctccaggcactgggaaaaccacgaccctg
gtggagatcatcctgcaggctgtgcagcagggcctgaaggtgctgtgctgtgccccgtcc
aacgtggccgtggataacctggtggagcggctggccggctgcagggcgcggctgctgcgg
ctgggccaccccgcccgcctgctccagcccatccagcagcactccctggacgccgtgctg
gcccgcggggacaacgcccacgtcgtggctgacatcaggagggacatcgaccgcgcctgg
gccaaaaccaaaaaggcccaagacaagggagagcgcagccattttctgggtgagatcaag
accctgaggaaggagctgaaggagagagaagaggctgccatggctgcagccctcagccag
gccagcgttgtccttgccaccaacacaggtgcttcctcggacggccccctgaagctgctg
cctgaaacccactttgacctggtggtgattgatgagtgtgcccaggctctggaagccagc
tgctggatccctctgctgaaggctcccaagtgcatcctggctggggatcacaagcagctg
ccccccaccatcatctcccacagggcggcggccgaggggctgtccctgagcctgatggag
cggctggcggggcactacggggagcgggcggtgcggatgctgaccgtgcagtaccgcatg
caccggcacatcatggaatgggcgtccgcggagctctacggcggccggctcagcgcacac
ccctccgtggcacagcacctgctcagggacctgccaggtgtctctgacacagaagagacc
agcatccccttgttgctcatagacaccgctggctgtggcctgtttgagctggaagtggag
gatgaacagtccaaggggaatccaggggaggtccagctggtggggatgcacgtccaggcc
ttggtggatgctggtgtgaaggccaaggacatcgctgtggtggccccctacaacctccag
gtggacatgctccgacagcacctctgccacagccaccccgagctggaaattaaatcagtg
gatggtttccagggaagggagaaggaggcagtgatcctgtcctttgtcagatccaacagg
aaaggtgaggtgggcttcctggccgaggagcggcggatcaacgtggcggtgacgcgggcg
cggcgccaggtggccgtggtgtgtgacagccacaccgtgggcagccgccccttcctgcgg
cgcctgctggaccacctgtcccagcacggcctcgtgcgctccgccttcgagtacctggat
gacctcgtgccccaaaactaccccggggagggaggggcacagcgccagcagggccccaaa
gcgccgggccccaaagcgcggccggctccggctgggaagctcaaggcggcggcagccgga
gcggggagccagaaaccgggagcacggagctccccgagcgctgccgcagctgggagggac
gcctcagggtcaaaggagggtggggacaggttcagggccatgctggtggccttcctggcg
agcagcgaggcgcagctggatttcccgacatccctgaattcccacgagaggatgctggtc
cacgtgctggcagaggagtacgggctgcagcacctgagctccggggagggccaggacagg
tacatcagcgtccgcaagagactccccaagcagcccccgctgccctctcagccccttcct
gagccccttcctgagccccttcccgagcctcagcatccccacgggaacatccctgaccct
gcggagccgggggaaagcggcgagggctcggggaaagtggacctgaaatccctgcacctg
gagagagtccagagggagaaagccaggcgggaggaggcagccaggaaggtgcaggagccc
aagagtggcaaaaggaaaaaggagaagagtgaagccaaaggaaaaccggccatcgggagc
gcggccggagaggatttcgacgctctgatctccgctgccatggaagctgacaggacctgt
ggcttcccccgctgcaaggcctctgtcaccaccctgggccagctctgccaccactgccag
cggctcttctgcctcagccaccacatccccgaggtccatggctgtggggagaaggccaag
gcgcaggcacggcagcggatcagccgggaagggatcctgtaccccgggagcggctccaag
gacaaatccctggatcccgccaggcgagcccacctccagcggcgcctggaccagaagctc
aatctgtcctgcccttcccacagagctccttggaggctgattcccactgggaaagcccac
actgacagcaaccaggtgagctttgcaggtggtagggatcctggtgtccatcctggacat
tttcctaatacttcacacagggtccatctatcccacccccaaaatagctccagcagcatt
tttttgtccccaggataa
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integrated database retrieval system
