Onychostruthus taczanowskii (white-rumped snowfinch): 121335062
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Entry
121335062 CDS
T07590
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03030
DNA replication
otc03410
Base excision repair
otc03420
Nucleotide excision repair
otc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121335062 (RFC1)
03410 Base excision repair
121335062 (RFC1)
03420 Nucleotide excision repair
121335062 (RFC1)
03430 Mismatch repair
121335062 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otc03032
]
121335062 (RFC1)
03400 DNA repair and recombination proteins [BR:
otc03400
]
121335062 (RFC1)
DNA replication proteins [BR:
otc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121335062 (RFC1)
DNA repair and recombination proteins [BR:
otc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121335062 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
AAA_30
Rad17
RNA_helicase
BRCT_2
AAA_5
AAA_16
RuvB_N
AAA_33
AAA_17
AAA_7
AAA_18
nSTAND3
TIP49
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
121335062
NCBI-ProteinID:
XP_041258768
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MALARGPPRPPRSPARRGRDGSAARRGAGVGAKAGAWSRERPARHRDRAAAMDIRKFFGV
VPPGKRQQCEAVKKSEKIKNGEGPSSGKKREKETKVNNSPSEDDSKQKRTKKKRRIIYDS
DSEEEEQSVKKSKKSPEKKAAASKPGKVLKQDPVVYISETDEDDDFANKRISLKPKENGT
SAIGCPGTNTGKKEEVKPQAKSKPLSPVKQTPTSALDFFGTRSVQRSEKKLVASKRKEPS
QSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAMLDETPQKKKARKNTEGEQTV
LSINSSPNATAGYKQTERVKATDSAGAAKNYSAKPETKSEQLKGSCLSSQSSDGKKEEIA
EKERGAQNSLSRGKAASGKEEKTTPKKEKVSPKKTESVSPEDSEKKRNNYQAYRSFLNRE
GPKALGSKEIPQGAENCLEGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLV
MGRDCGQSKCEKASGLGTKIIDEDGLFDLIRTMPGKKSKYELAAETEAKKVESKPKKTPQ
KAEAGKRNFSPYKREANNKKCNSTPEKGETIRSVKKETTAVQKLTDFKRQTVEEKEAPKP
KGSLVSEVNEDGTERLLWVDKYKPVSLKAIIGQQGEQSCANKLLRWLRNWHKNTLEGGQV
KPSKTGSKDDGTGFKAALLSGPPGVGKTTTAALVCKELGYSYVELNASDTRSKNSLKEVV
AESLNNTSIKDFCSGASSSVSGKHVLIMDEVDGMAGNEDRGGIQELIALIRHTKVPIICM
CNDRNHPKMRSLVHYCLDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDI
RQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLGPFDVVRKVFATGEEAARMSLIDKS
DLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRAADSICDGDIVDRQIRSKQSW
NLLPTQAIYASVLPGELMRGYMSQFPVFPSWLGKFSSTGKHDRVIQELAMHMSLRTQSCK
RTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDSYCLMKEDVENIMEISTWGGKPSPF
SKLDPKVKAAFTRAYNKEAHLTPYSLSAVKASKRQSGSAATSDLSEDLTVEEIQSDEDEQ
DSVDSDAMIKQKKVKSSKLPKREKNEETTKKEGKRKEKTRHLE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggccctggcccggggcccgccccggccgccccgcagccccgcccgtcgcggccgtgac
ggcagcgccgcgcgccggggcgcgggagttggcgcgaaggcgggagcatggagccgggag
cgtcccgctaggcacagggaccgcgccgccgccatggatatccggaaattctttggtgtt
gtacctcctggaaagcgacaacagtgtgaggctgtgaaaaagagtgaaaaaattaaaaat
ggtgaaggaccctcaagtgggaagaaaagagaaaaggagactaaggtgaataattcaccc
agtgaagatgattccaaacagaagcggacaaaaaagaagagaagaataatctatgattca
gattcagaagaggaggagcagtcagtgaaaaaatccaagaagtcacctgagaaaaaagca
gctgcttcaaaacctggtaaagttctaaagcaggatcctgttgtttatatttcagagaca
gatgaagatgatgattttgccaataaaagaatttccctgaaaccgaaggagaacgggacg
tcagcgattggttgtccaggaacaaatactgggaaaaaagaagaggtaaaaccacaagct
aaaagcaaacccctctctccagtgaaacagactcccacctctgcacttgatttctttggg
acaaggagtgtccaacgctcagaaaagaagctggtagcaagtaaaaggaaagagccttca
cagagcagagacagcacactagatgatgaggccattgctaggcaactgcagcttgaagaa
gattcagagctggagagacagctgcatgaagatgaagaatttgctagaactctggccatg
ttggatgaaacaccacagaagaaaaaggctcggaaaaacacagaaggagagcaaacagta
ctgagcatcaacagcagccctaatgcaacagcagggtataagcagacagaaagagtgaaa
gcaacagactcagctggtgcagccaagaattactctgcaaagccagaaactaaatctgaa
cagttgaaaggttcttgtttatcctcacaatcatctgatggtaaaaaagaagagattgct
gaaaaggaaagaggtgcgcaaaattcactatcaagaggaaaagcagcttcagggaaagaa
gagaagacaacaccaaagaaagagaaagtttctcccaagaagactgagtctgtaagtcct
gaggactccgaaaagaagcgaaacaattaccaagcttaccgaagcttccttaatcgtgag
ggtcccaaagcactgggctccaaagagatacctcagggagctgagaactgcttggaaggc
ctgacatttgtaattacgggtgttctggagtgtattgagagagatgaggccaagtctctg
attgagcgttacggagggaaagtaactggcaacgtcagcaagaagacaaattacctggtg
atggggcgggactgcggccagtccaagtgtgagaaggcatcaggtttaggtacaaaaatt
attgatgaggatggtctatttgatcttattcgaactatgccaggcaaaaagtcaaaatat
gagctggcagctgaaacagaggcaaaaaaagtggagtcaaaacccaaaaagacaccacag
aaagctgaagctgggaaaaggaattttagcccctacaaaagggaagctaataataaaaaa
tgcaactctactcctgaaaaaggagaaaccatcagatctgtcaagaaagaaaccacagct
gttcaaaaacttacggacttcaaacgtcagactgtagaggagaaagaagccccaaaacct
aaggggagcttggtttctgaggttaatgaagatggcacagagagattgctatgggtagat
aaatataagcctgtatctcttaaagcaattattggacagcagggtgagcaaagctgtgcc
aataaactgctccgatggctcagaaactggcacaagaacaccttggaaggtggacaagta
aaacccagtaaaactggaagcaaggatgatgggacaggctttaaagcagcattactttct
ggtccgcctggagttggtaaaactactacagctgctttggtttgtaaggagctggggtat
agctacgtggagctgaacgccagcgacactcgcagcaagaacagtctaaaggaagtagtt
gctgagtcacttaacaacaccagcatcaaagacttctgttctggtgcatcttcatcagtt
agcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaagacaga
ggagggattcaggagttgattgctttgatccgacacacgaaggtacccatcatctgtatg
tgcaacgaccgcaaccaccctaaaatgcgctccttggtccactactgtttggatcttcgt
ttccagagacctcgtctagaacagatcaaaggtgccatgatgtctattgcatttaaagaa
ggtttaaaaattcccccacctgctatgcaagagataatcctggcagcaaatcaggacatc
agacaggttttacataatcttaatatgtggtgtgcaaaagacaaatcactgacttacgat
gaggctaaaacagatgccagcagagccaaaaaggacatcaaactgggccctttcgatgtt
gtccggaaggttttcgctactggagaggaggctgcccgtatgtctctcatagacaaatca
gatcttttcttccatgattattcactagcacctctctttgtccaagagaactatgtgcat
gtgaaaccagctgctgctggaggtaacttaaaaaagcacttggtgctcttgagtagagca
gctgatagtatatgtgatggtgatatagtggacagacagattcgtagcaagcagagctgg
aatcttcttccaacacaggctatttatgcaagtgttctcccaggggagctgatgaggggt
tacatgtcccagtttcctgtctttcccagctggctggggaaattttcatccacaggcaaa
cacgatcgcgtcattcaagaactggcaatgcacatgagtctcagaactcagtcatgcaag
aggacagtaaatatggaatatttgtcgtatttgcgggatgcacttgtccagcccttgaaa
gactttggagcagatggtgtacaacaagctataacatttatggactcttactgcttgatg
aaagaagatgttgaaaatatcatggaaataagcacgtggggaggcaaacccagtcctttt
tcaaagttggatcccaaggtcaaagcagcttttacacgtgcctacaacaaagaggcacat
ctgactccatattcacttagtgctgtcaaagcatctaaaaggcagtcgggatctgcagcg
acctcagatctgagtgaagacttgactgtggaagagatccagtctgatgaggatgagcag
gattctgttgacagtgatgcaatgataaagcaaaaaaaggtaaagtcttccaagctgcca
aaaagagagaaaaatgaagaaacaacaaaaaaagaagggaagagaaaagagaaaacaaga
catttagagtaa
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integrated database retrieval system
