Onychostruthus taczanowskii (white-rumped snowfinch): 121335082
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Entry
121335082 CDS
T07590
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04140
Autophagy - animal
otc04148
Efferocytosis
otc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121335082 (VPS16)
04148 Efferocytosis
121335082 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121335082 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121335082 (VPS16)
Membrane trafficking [BR:
otc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121335082 (VPS16)
Hops complex
121335082 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121335082
NCBI-ProteinID:
XP_041258808
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKTPS
SRPLLEIYSASGLLLASVPWKSGHLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIEDLKLRRLPEVPGLQKPPPCWT
VLAQDRVTMVLLAMGQELFLLDNTSCSVLTPPGLSPSAGPFLRVAVSFTQRHLALLCDCG
TVWMGAASLREKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNSSECIRF
VLDEDSYLVPELDGVRILSRSSHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPPEGFVRM
CQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGV
SRILAHWACYKVQQKDKSDEEVAQAINQKLGDTAGISYSDIATRAYDCGRAELAIKLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVLGGYCQKRIEGRVAALQNALDEFYKAK
NDFAAKATEEQIKLLRLQRHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIP
DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVKAFVLVGDLEQAAEAAMERRSEAEMSLVLARCCPGTDTALADRLTRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctaccggaagctg
gagctctactccatggaatgggggctgcgggaggacctgcgtgactgtgtggtggcagct
gccccgtacgggggtcccatagctctgctgaggaattcccggcgggacaagacccccagc
tcccgccctctcctggagatctactcggcctcagggctgctcctggccagtgtcccgtgg
aagagcggccacctggtgcacctgggctggacagcgggggaggacctgctgtgcatccag
gaggatgggactgtcctggtctacaacctcttctgcgagttcaagcggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacggagttcggg
acgggcgtggccatcctgacgggagcgctgcgcttctccctggccaccaacatcgaggac
ctcaagctgcgccgcctgcccgaggtccctgggctgcagaagcccccgccgtgctggacc
gtgctggcccaggacagggtgaccatggtgctgctggccatgggacaggagctcttcctg
ctggacaacacctcctgctccgtgctgacgccccccgggctgagcccctcggcggggccg
ttcctgcgcgtggccgtgtccttcacccagcggcacctggcgctgctctgcgactgcggc
accgtctggatgggagcggcctcgctccgggagaaattctgtgagttcaacaccggcatc
cgatccccgcccaagcagatggtttggtgcacgcggccccgcagccggcagcgagccgtg
gtgctggcctgggagcggcagctgatggtggtgggcaactcctcggagtgcatccgcttt
gtcctggatgaggattcctacctggtgcccgagctggacggggtccggatcctgtcccgc
agctcccacgagttcctgcacgagatcccagaggccagccaggagattttccgcatcgcc
tccatggctccgggcgctctgctgctggaggcgcagaaggagtacgagaaggagagccag
aaagccgacgagtacctgcgggagatccgggagcagcagctgctccccgaggccgtgggc
cagtgcatcgaggccgcgggctacgagcacgagcccgacacccagaaatccctgctgagg
gcagcttcctttgggaagtgtttcctggataagttccccccggaggggttcgtgcgcatg
tgccaggacctgcgcgtcctcaacgccatccgggactaccagattgggatcccgctcacc
ttcacgcaatacaagcagctcaccatcgaggtgctgctggacaggctggtcctgcgccgc
ctgtacccgctggccatccgcatctgcgagttcctgcgcctgccggagatgcagggcgtc
agccgcatcctggcacactgggcctgctacaaggtgcagcagaaggacaagtcggacgag
gaggtggcccaggccatcaaccagaagcttggggacacggcgggcatctcctactcggac
atcgccacgcgcgcctacgactgcggccgcgccgagctggccatcaagctgctggagtac
gagccccggagcggggagcaggtgccgctgctgctgaagatgaaacggagcaaactggcc
ctgggcaaagccatcgagagcggggacaccgacctggtgtacacggttgtgctgcacctc
aagaacgagctcaaccgcggctccttcttcatgaccctgcagaaccagcccgtggccctg
agcctgtaccgccagttctgccggcaccaggagcgggagacgctgaaggatttgtacaac
caggacgacaaccaccaggagctgggcaacctgcacgtgctggggggctactgccagaag
cggatcgagggccgcgtggccgccctgcagaacgccctggacgagttctacaaggccaag
aacgacttcgctgccaaggccacggaggagcagatcaagctgctgcggctgcagcggcac
ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggccacc
ctcatcctggacgggcaccacaagcgcgccgagcagctctaccgggacttcaggatccct
gacaagaggtactggtggctgaagatcaacgccctggctacccgcggggactgggaggag
atggagaagttctccaagagcaagaagtcgcccattgggtacctgcccttcgtggaggtg
gcggtgaagcaccacaaccgctacgaggccaagaagtacgcgccgcgcgtgccgcccgag
cagcgcgtcaaggccttcgtcctcgtgggggacctggagcaggcggccgaggcggccatg
gagcgcaggagcgaggccgagatgagcctggtgctggctcggtgctgccccggcaccgac
accgccctggccgacaggctcacccgggcacgggcacagctcctcaaaaagtga
DBGET
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