Onychostruthus taczanowskii (white-rumped snowfinch): 121335257
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Entry
121335257 CDS
T07590
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121335257 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otc03041
]
121335257 (DHX15)
03009 Ribosome biogenesis [BR:
otc03009
]
121335257 (DHX15)
Enzymes [BR:
otc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121335257 (DHX15)
Spliceosome [BR:
otc03041
]
Complex A
U2 snRNP components
U2 related factors
121335257 (DHX15)
Complex B
121335257 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121335257 (DHX15)
Ribosome biogenesis [BR:
otc03009
]
Eukaryotic type
90S particles
Helicases
121335257 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
121335257
NCBI-ProteinID:
XP_041259103
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYASAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgatctgggggacgattacagctccagcaagaaacgcacc
accgacgggaaagatcgggaccgggacagggaccgagatgaccgttccaaagatcgggac
agggatcgtgacagagatagagatcgtgacagagagagggacaaggaaaaagatctgcga
cctacatccaactctacttattatgcatctgctgggctaccagctataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacataccccacgatattatgatatc
ctgaaaaaaaggctacagcttcctgtctgggaatataaggaaagatttacagatattttg
attaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcaatggtgtgttgactacatgcgctcgttgcctggcccgaagaggggagtggcatgc
acccagccccggcgagtggccgcaatgagcgtggcacagcgcgttgctgatgagatggat
gtcatgctgggccaggaggttgggtactccattcggtttgaagattgcagtagtgcaaaa
accattctgaagtatatgactgatggtatgttgcttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccacgagagaacactggctacggat
atcttgatgggagttttgaaggaagttgtgagacaaagatctgatctgaaggttatcgtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttctc
actatcccgggtcgcacccatcctgtggagatattctatactccagaacctgaaagggac
taccttgaggctgccattcgaacagtgatacagattcacatgtgtgaagaagaagaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgggaaattgatgacttaggtcctgaagttggtgacataaaaatcattccactgtattcc
acccttcctccacagcagcagcaaagaatatttgaacctcccccaccaaaaaaacaaaat
ggagcaataggacgaaaggttgtggtgtccactaacattgctgagacatcattgacaata
gatggcgtagtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcctcgt
atcagagtggagtctctgctggtgactgccatcagtaaagcgtctgcccagcagcgggct
ggccgtgctggtcgtactcgaccaggcaagtgcttcaggctttatacagagaaagcctac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttaaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattggatccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagattttaccagtcgggactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcattac
ttaacagtaaaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaaa
ccagaatgggtgctgtataatgagtttgtccttacaacgaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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integrated database retrieval system
