Onychostruthus taczanowskii (white-rumped snowfinch): 121336096
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Entry
121336096 CDS
T07590
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121336096 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otc04990
]
121336096 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
otc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121336096 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
EsxC
Motif
Other DBs
NCBI-GeneID:
121336096
NCBI-ProteinID:
XP_041260859
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQQRPTQFPRA
FSMTYQPAGLNSRPSPVGAMQAPMASVYDPLQSSELRRRHSASSSPSQVRVGPEQLKHAA
QVCPNSPVEVEVPGLKVLHVQFNSPLQLYSQSNIMDTLQGQISSVSPDFPSLEQHNQTPG
NIAIDKQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKAPTTK
VASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVEDQIY
CEKHARERVVPPEGYEVVTVFPK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgcg
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacacaccttgaggcgcagaacaaaatcaagggttgcacagatgaactgactctgaca
gtcagcagaacagaggcaaaagtctggtcaccacttgtaagcgaggagggaaagacacac
ccttataagatgaatctggcctctgagccacagcagagaccgacgcagtttccgcgtgcg
ttcagcatgacataccagcccgctggtctgaacagccgcccatcgccggtgggtgcgatg
caggctcccatggcctccgtgtacgaccctctgcagagctccgagctgcggcgcaggcac
agcgcctcctccagccccagccaggtccgagtggggcctgagcagctgaagcacgcggcc
caggtctgccccaacagccctgtggaagtggaggtgccgggactcaaagtgctgcacgtg
cagttcaattctcccctgcagctctattcgcagagcaacatcatggacaccctgcagggg
cagatctcttctgttagccctgatttccccagtttagaacagcataaccagaccccaggc
aacattgccatagacaaacagtctgaagtttacaagatgctgcaggagaatcaagagtca
aatgagccacccagacagtctgcttcgtttcttgtgttgcaagagatcttggagtcagag
gagaaaggagaccctaccaaaccatctggatttaggagcgtcaaagcccctaccacaaag
gtggcctcatcgattgggaatgcccagaagctgcccatgtgcgacaagtgtggatctggc
attgtagggatgtttgtgaagatccgggacaagcagcgtcaccccgagtgctacgtgtgc
agcgactgtggcaccaatctcaagcagaaaggacacttctttgtggaagaccaaatctac
tgcgagaagcatgcgcgggaacgggtggttccgccggagggctacgaggtggtcaccgtc
ttcccaaagtaa
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