Onychostruthus taczanowskii (white-rumped snowfinch): 121336245
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Entry
121336245 CDS
T07590
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121336245 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otc04121
]
121336245 (TRIM54)
Ubiquitin system [BR:
otc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121336245 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
RHH_9
Sina_RING
CYP38_PsbQ-like
Zn_ribbon_FGT1_2
DUF5799
Motif
Other DBs
NCBI-GeneID:
121336245
NCBI-ProteinID:
XP_041261162
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMWGRDMRRPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKSELSDGIAM
LVAGNDRIQAIITQMEEICHTIEENGRRQKQHLGLRFDALYGILEERKKELLQSIAAEQE
AKLQRVRGLIRQYGDHLEASSKLVESAIQAMEEPQMALYLQHSKELLKKITDMSKASMSS
RPEPGYENMDHFSINVDYVAEMLRTIEFQTEPLGEDEGDGAGDGSEAAVDEDRLDSLEVP
EAAEDVGPRQKPASSPHGQH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtagggctgaagccgcttctggcggaggcgcggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcgggcgggcggttccgatgcccgtcc
tgccggcacgaggtggtgctggaccggcacggggtgtacggattgcagcggaacctgctc
gtggagaacatcatcgacatgtgggggcgagacatgcggagaccccttcatgccaaggct
gagcagcacctcatgtgcgaggagcacgaggacgagcggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctgtgcaaggtgttcggggcgcacaaggactgcgaggtg
gccccgctgccggccgtctaccagcgccagaagagcgagctcagcgatggcatcgccatg
ctggtggcggggaacgaccggatccaggccatcatcacacagatggaggagatctgccac
accatcgaggagaacgggcggcggcagaaacagcacctggggctgcggttcgacgcgctc
tacggcatcctggaggagcgcaagaaggagctgctgcagagcatcgcggccgagcaggag
gccaagctgcagcgggtccgcgggctcatccgccagtacggagaccacctggaggcctcc
tccaaactggtggagtcagccatccaggccatggaggagccccagatggccctgtacctg
cagcactccaaggaactcctgaaaaagatcacagacatgtccaaggcatcaatgagcagc
cgccctgagcccggctatgagaacatggaccacttctccatcaacgtggactacgtggct
gagatgctgaggaccatcgagttccagacagagccactgggtgaggatgagggggatgga
gctggggacggcagcgaggctgcagtggacgaggaccggctggacagcctggaggtgccc
gaagctgctgaagatgtggggccgaggcagaagccagcgagctctccccatggtcagcac
tga
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integrated database retrieval system
