Onychostruthus taczanowskii (white-rumped snowfinch): 121336262
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Entry
121336262 CDS
T07590
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04145
Phagosome
otc04148
Efferocytosis
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04810
Regulation of actin cytoskeleton
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121336262 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121336262 (ITGB5)
04148 Efferocytosis
121336262 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121336262 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121336262 (ITGB5)
04810 Regulation of actin cytoskeleton
121336262 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121336262 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otc04515
]
121336262 (ITGB5)
Membrane trafficking [BR:
otc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121336262 (ITGB5)
Cell adhesion molecules [BR:
otc04515
]
Integrins
Integrin beta subunits
121336262 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
DUF2975
vWA_SIBA-E
OppC_N
Motif
Other DBs
NCBI-GeneID:
121336262
NCBI-ProteinID:
XP_041261199
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MDLSLSMNDDLDNIRNLGTKLAEEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCI
GYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKI
GWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLG
EKLAENNIHLIFAVTKSHYILYKNFTTLIPGTTVEILHKDSKNIIELIVKAYNSIRSKVE
LTVWDSPEDIGLTFTATCQDGLSYPGLRKCGDLKIGDTVSFEVAVEARSCPAEDASHSFT
IKPAGFRDTLEVAVTYSCQCGCTGRAAPASGKCSGNGTYACGLCDCDPGYLGARCECEEG
AGGELHHALCREAEGKPLCSGRGECSCNQCQCYESEFGNIYGPFCECDDFSCARYKGVLC
SGHGECHCGECKCHAGYIGDNCNCSTETDSCVSSDGQMCSGRGACVCGKCQCTEPGAFGE
TCEKCPTCPGVCSTKRDCIECKLFNSGRLADNQTCQKHCKDEIITTVDVLETDDPNAILC
AYPVNNCVMKFTYLELPSGKSNLTVLKEPACSSAPSAVTIVLAVIGSVVLIGIILLALWK
LLVTIHDRREFDRFQSERSRARYEMASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtccctgtccatgaacgacgacctggacaacatccgcaatctggggaccaag
ctggctgaagagatgcgaaagctcaccagcaatttccgtctgggctttggctctttcgtg
gacaaaaacatttctcctttctcctacacagcgccaagataccaaaacaatccctgcatt
ggttataagctgttccccagctgtgtcccatcctttggcttccgccacctcctgtccctg
acggataaagtcgaccgtttcaacgaagaagtccagaaacagaaagtttcccgcaaccga
gatgctccagagggcggcttcgatgccattttgcaggctgctgtgtgcaaggagaagatt
ggctggcgtaaggaggcatctcacctgctggtcttcaccacggatgatgtgccccacata
gccctggatgggaagctgggggggctggtgcagccccacgatggccagtgccacctgaat
gaagccaacgagtacagcgcgtccagccagctggattatccttccctggcacttcttggg
gagaaacttgctgaaaacaacatccacctgatttttgctgttacaaaaagtcattacatc
ctctacaagaactttacgactttgatccctggaacaacagtggagattttgcacaaagat
tccaagaatatcatcgagctgattgtcaaagcctacaacagtattcggtccaaggtggag
ctcacagtctgggacagccctgaggacattggcttgaccttcactgccacgtgccaggat
gggttgtcctatcccgggctcaggaagtgtggggacctcaaaattggagatacggtttcc
ttcgaggtggctgtggaggcgcggagctgccctgccgaggacgcttcccacagcttcacc
atcaagccggccggcttccgggacacgctggaggtggccgtgacctacagctgccagtgc
ggctgcaccggccgggccgcgccggccagcggcaaatgcagcggcaacgggacctacgcc
tgcgggctctgcgactgcgaccccggctacctgggggcccgctgcgagtgcgaggagggc
gccggcggcgagctgcaccacgcgctgtgccgtgaggccgagggcaagcccctgtgcagc
ggcaggggggagtgcagctgcaaccagtgccagtgctacgagagcgagttcggcaacatc
tacgggcccttctgcgagtgcgacgacttctcctgcgccaggtacaagggagtcctctgc
tcaggtcacggggagtgtcactgcggggagtgcaagtgccacgctggctacatcggggac
aactgcaactgctccacggagacggacagctgtgtttccagcgacgggcagatgtgcagc
ggccgcggtgcctgcgtctgcgggaagtgtcagtgcaccgagccaggcgctttcggagag
acctgtgagaagtgtcccacctgcccaggtgtctgtagcactaaaagggattgtattgaa
tgcaagctgtttaactcaggaagactggctgataaccaaacctgccaaaagcactgcaag
gatgagatcatcaccactgtggatgttcttgaaacggatgaccccaatgcgattctctgt
gcctacccagtgaacaactgcgtcatgaagttcacctacttggagcttcccagtgggaaa
tccaacctcaccgtcctcaaggagccagcctgcagctcagcccccagtgctgtgaccatc
gtgctggcagtgattggcagcgtggtgctgattggcatcatcctgctggcgctctggaag
ctgctcgtcaccattcacgacaggcgggagttcgaccgattccagagcgaacgttcccgt
gccagatatgaaatggcatccaatcctctctaccgaaagcctatttccacgcataacgta
gagttcaccttcaacaagctcaacaagtcttacaacggtacggttgactga
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