Onychostruthus taczanowskii (white-rumped snowfinch): 121337119
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Entry
121337119 CDS
T07590
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121337119 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otc03019
]
121337119 (EXOSC2)
Messenger RNA biogenesis [BR:
otc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121337119 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
121337119 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
121337119
NCBI-ProteinID:
XP_041262906
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MAAVTMRLPVARAPLDSSALRGGEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIMALVTHKIMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDSEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccatgaggctgccggttgcccgtgcccctctggattccagcgcgctc
cggggcggcgagaagcacttggtggcaccgggggacacgatcaccacggatacgggatac
atgaggggccacggtacttatgtggaggacgacaagctgatcgcctcggtggccggcgtg
gtggagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcggcaggattaccgaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttgctgtcgtctataaatttacctggtggggag
ctgagaagaaaatcagcagaagatgagcttgcaatgagggactacctgcaggaaggagat
ctcatcagtgcagaggtccagtctatattttctgatggggctgtatctctgcacacccgg
agcctgaagtacgggaagcttgcccagggtgtgctggttcaggtctctccctctctcgtg
aaacgtcagaagactcatttccatgaccttccctgtggtgcatccgtgatcctcggcaac
aacggcttcatctggatctacccaaccccagagcagaaggatgacgaggctggaggctac
actgccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcatcatggctctggttactcacaagattatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaaaccagaggtgacagaggag
atcgttctggaagctcgacagaggttgctggattcagagggatag
DBGET
integrated database retrieval system
