Onychostruthus taczanowskii (white-rumped snowfinch): 121337403
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Entry
121337403 CDS
T07590
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121337403 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otc04147
]
121337403 (COPA)
Membrane trafficking [BR:
otc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121337403 (COPA)
Exosome [BR:
otc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121337403 (COPA)
Exosomal proteins of bladder cancer cells
121337403 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
TPR_COPA_B
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
121337403
NCBI-ProteinID:
XP_041263422
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSAS
DDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL
SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIW
RMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHD
RFWVLAAHPNLNLFAAGHDGGMLVFKLERERPALAVHGNSLFYVKDRFLRQLDFGSSRDV
AVMQLRSGSKFPVFSMSYNPAENSVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKR
SSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVPVPNCDEIFYAGTGNLLLRDSDSI
TLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAILICNRKLESLCQIHENIRVKS
GAWDESGVFIYTTSNHIKYAVTSGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTI
DPTEFRFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQRKGYPEVALHFVKDEKTRFSLA
LECGNIEIALEAAKALDDKGCWEKLGEVALLQGNHQVVEMCYQRTKNFDRLSFLYLITGN
LEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQKSLAFLTAATHGLDEEAE
SLRESFDPEKETIPAVDPEARLLQPPAPVLPLDTNWPLLTVSKGFFEGSIAGKGKGGALA
ADIDMDAVGTEGWGEDAELQLDEDGFVDAGEGFGEEGTGKGQEEGGGWEVEEDLDLPPEL
DVPAGPAGTAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNF
GPYKQLFLQTFSRGRTTFQALPSLPAMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQL
CYQLTTAGKFEEAVEKFRLILLSVPLLVVDNKQEIAEAQQLVAICREYIVGLSMEIERKK
LPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKSAATFARRLLELG
PKPEVAQQTRKILAACEKNPVDSHQLNYDQHNPFDICAASYRPIYRGKAVEKCPLSGACY
SPEFRGQICRVTTVTEIGKDVLGLRISPLQFR
NT seq
3521 nt
NT seq
+upstream
nt +downstream
nt
ggcccgtgcgaggcatcgatttccacaagcagcagccgctcttcgtgtcggggggcgacg
actacaagatcaaggtctggaattacaaactgcggcgctgcctcttcaccctgctgggac
acctggactacatccgcaccaccttcttccaccacgaatatccctggatcctgagcgctt
ccgacgaccaaaccatccgcgtgtggaactggcagagccgcacctgcgtctgcgtcctga
cggggcacaaccactacgtgatgtgcgcccagttccaccccagcgaggacctggtggtgt
cggccagcctggaccagaccgtgcgcgtctgggacatctccggcctcaggaagaagaacc
tgtcccccggggccgtggagtcggacgtgcgcggcatcaccggcgtggatctgttcggca
ccaccgacgccgtggtcaaacacgtgctggagggccatgaccggggggtgaactgggctg
ccttccacccctccatgcccctgatcgtgtctggggccgacgaccgccaggtgaagatct
ggaggatgaacgagtccaaggcctgggaggtggacacgtgccggggccactacaacaacg
tttcctgcgctgttttccacccgcgccaggagctgatcctcagcaactccgaggacaaga
gcatccgggtgtgggacatgtccaagcggaccggcgtccaaacgttccggcgcgaccacg
accggttctgggtgctggcggcgcatcccaacctcaacctcttcgctgctgggcacgacg
ggggcatgctggtgttcaagctggagcgggagcggccggcgctggccgtgcacggcaatt
ctctgttctacgtcaaggatcgcttcctgcggcagctcgacttcggcagctcccgcgacg
tggccgtcatgcagctgcgcagcggctccaagttcccggtgttcagcatgagctacaacc
cagctgagaattccgtgctgctctgcactcgagccagcaacctggagaacagcacctacg
acctctacaccattcccaaggatgcagattcccaaaatcccgacgctccggaggggaagc
gctcctcggggctcacggccgtgtgggtggcgcggaaccgattcgccgtcctggacagga
tgcactcgatcctgatcaagaacctgaagaacgagatcaccaagaaggttccggttccca
actgcgacgagattttctacgcgggcaccgggaacctgctcctcagggactccgactcca
tcaccctcttcgacgtccagcagaaaaggactttggcctcggtgaagatctccaaggtga
agtacgtgatctggtcggccgacatgtcccacgtggccctgctggccaagcacgccatcc
tgatctgtaaccggaagctggagtcgctgtgccagatccacgagaacatccgggtgaaga
gcggcgcctgggacgagagcggcgtcttcatctacaccaccagcaaccacatcaaatacg
ccgtcacctcgggggatcacgggatcatccgcacgctggacctgcccatctacgtgacgc
gggtgaagggcaacaacgtctactgcctggaccgggagtgccggccccgcgtgctcacca
tcgaccccaccgagttccgcttcaaactcgccctcatcaacaggaagtacgacgaggtgc
tgcacatggtgcggaacgccaagctggtggggcagtcgatcatcgcgtacctgcagcgca
agggctaccccgaggtggccctgcacttcgtcaaggacgagaaaacgcgcttcagcctgg
ccctggagtgcggcaacatcgagatcgccctggaggcagccaaggccctggacgacaagg
gctgctgggagaagctgggcgaggtggctctgctgcagggcaaccaccaggtggtggaga
tgtgctaccagcgcaccaagaacttcgaccgcctctccttcctctacctcatcaccggca
acctggagaagctccgcaagatgatgaagatcgcggagatccggaaggacatgagcgggc
actaccagaacgcgctgtacctgggggacgtggccgagagggtgcggatcctgcggaact
gcggccagaaatccctggcgttcctgacagccgccacgcacgggctggacgaggaggccg
agagcctgcgggaatccttcgatcccgagaaggagacgatcccggccgtggatcccgagg
cgcggctgctgcagccgccggcgccggtgctgcccctggacaccaactggcccctgctga
ccgtgtccaagggcttcttcgagggctccatcgccgggaaagggaaaggaggagccctgg
ctgctgacatcgacatggacgccgtgggcaccgagggctggggcgaggacgccgagctgc
agctggatgaagatggatttgtggatgctggggaaggattcggagaggaaggaacgggaa
aaggccaggaggaaggaggaggatgggaggtggaagaagatttggatcttccccctgagc
tggatgtccccgccggccccgcaggaacggctgaggacggattctttgtgccccccacca
aaggcaccagcccagcccaggtgtggtgcaacaattcccagctccccgtggatcacatcc
tggcaggatcctttgagacagccatgaggctgctccatgaccaggtgggagtgaccaact
tcgggccctacaagcagctcttcctgcagaccttctcccggggccggacgacgttccagg
cgcttcccagcctccccgccatgtacggatacccgcaccgcaactggaaagaggccgggc
tgaagaacgcgctgccggccgtggggctgaagctgaacgacctgatccagcggctgcagc
tctgctaccagctgaccacggccggcaagttcgaggaggccgtggagaaatttcggctga
tcctgctcagcgtgcccctgctggtggtggacaacaagcaggagatcgccgaggcgcagc
agctggtcgccatatgccgggaatacatcgtggggttgtccatggagatcgagaggaaga
agctgcccaaggagacgctggagcaacagaaaaggatctgtgagatggccgcctacttca
cgcactccaacctgcagcccgtgcacatgatcctggtgctccgcaccgccctcaacctct
tcttcaagctcaagaacttcaaaagcgccgccaccttcgcccggcgcctgctcgagctcg
gccccaagcctgaggtggcccagcagacgcggaagatcctggcggcgtgcgagaagaacc
ccgtcgacagccaccagctgaactacgaccagcacaaccccttcgacatctgcgccgcct
cgtaccgccccatctaccgcggcaaagccgtggagaagtgtcccctcagcggggcctgct
acagccccgagttccggggacagatctgccgcgtcaccacggtgacggagatcgggaagg
acgtgctggggctgcgcatcagccccctccagttccgctag
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integrated database retrieval system
