Onychostruthus taczanowskii (white-rumped snowfinch): 121337404
Help
Entry
121337404 CDS
T07590
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc02010
ABC transporters
otc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121337404 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121337404 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otc02000
]
121337404 (ABCA1)
Transporters [BR:
otc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121337404 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_23
R1_ABCA1
Motif
Other DBs
NCBI-GeneID:
121337404
NCBI-ProteinID:
XP_041263423
LinkDB
All DBs
Position
Unknown
AA seq
2034 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLIDNETFSDFLHHNMSMPSSAVEELLDAGVNL
QQVIVSGYRMRLRDLCNSSASSEFLMIQNQMAAMDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRQLSFNSSLWDLSETVETLRESVGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNSPEEFETENG
SVYTWMDAFNETDRAMQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGIMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYNEQYTFISNDAPEDAGTHNLLDALLDKPGFGTRCMQGHSILDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAVKRVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVNETPQDPPP
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggactcagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaatttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacaca
agtataaaggatgtccagaaggtcctgggaaaactacgcaagttgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatatgtctatgccatcatctgcagtagaggagctactggatgcaggggtcaacctg
cagcaggtcattgtgtctggttatcgaatgcgactgagagatctctgcaatagctcagca
tcatctgaatttcttatgatccaaaatcagatggcagccatggactctgaagccttcatt
tgcaccttgtcaaaggaaaaactccatgcagccgagcaagccttccgtgctaacctgaat
cctttgaagcctcttcagagacaactttctttcaattcctccttatgggatctgtcagaa
acggtggaaactttgagagagagcgttgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaagtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctaccaggctgtgtcacgcatcgtgtgtggccatcctgaaggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacgccctactgcaat
gaactaatgaagaacctggaatccagcccgctttccaggattatctggagggctttaaaa
cccttgctgattgggaagatcttgtacactccagatacgccagctataaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacattgctgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggaatttgagacagaaaatggt
tctgtgtacacctggatggacgccttcaatgagacagaccgggctatgcagaccatctcc
cgcttcatggagtgtgtcaacctggacaaactggagcctgtgcccacagaagtccggctc
attaacaagtccttggaacttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttccccaacatgtgaaatacaagatacgcatggac
attgataatgtggaaagaaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtgtggggaggctttgtctacctgcaggacgtg
gtagaacaggccatcatcagggttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggtatt
gtgtatgagaaggaagcccggctgaaagaaacaatgaggattatgggacttgacaacggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggactg
ctggtactgatcctgaagatggggaatctgctgccttacagcgatcctagtgtggtgttc
attttcctctcaatcttcggcgttgtgaccatcctccagtgcttcctcatcagtactgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttatgtgctgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagccttcggttttggttgtgagtactttgcactgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagctgtcatgatgctgtttgataccttcctctatggaatcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcatattggtttggggaggaaccacaggacaggcagcacccccatcctgac
cagaaagggtcttcagaagtctgcaaggaagaagagcctgtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtggatggtctc
acacttaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacttcaggaacagccttcatc
ctgggcaaagatatccgctctgagcttagcactatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctacgctcgg
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaagctctctggtggcatgcagaggaag
ctctctgttgccttagcttttgttggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccctattctcgcagaggaatatgggaactgcttctaaagtatcggcaa
ggtcgcaccatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccttggtcaaaaaggatgtagattcctctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacaccttgacaatagatgtg
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctcg
gaaactactctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaa
acctcagatggtacgttgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccgtttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccaaatg
aagggctggaagctcacccagcagcagttcatggctctgttgtggaagaggatgctcatt
gccaagagaagtcggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaacta
caaccctggatgtacaatgagcagtacacttttattagcaatgatgctccagaagatgca
ggcactcacaaccttttggatgcccttcttgataagccagggtttgggacacgctgtatg
cagggacattccatcctggacactccttgtactgtggggcagaaggaatggaccactgct
tcagtcccagagtcagtgctggacatcttcctgaaaggcaactggagcatggaaaatcct
tccccatcttgcgagtgtagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcagggggcctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccgcaatatatcagactacctagtgaagacctatgcgcagatcattgggaaa
agcttaaagaataaaatctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttcccttgtgcttcctccaagtcatgaagtcactgatgctgttaaacgggtgaag
aaaattttggagctggcgcaggggagctctggggatcgatttctcaacagtttatcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccag
cagggtgaaaatcccagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcaacagctctctgaagtagctctgatgaccacctctgtggatgtccttgtgtccatc
tgtgtgatctttgctatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgttatctactgg
ctggccaactttgtgtgggatatgtgcaactacattgttccggccacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctcctcctgtttctctatgggtggtccatcacccctctcatgtatccggcctcctttgtg
ttcaaaatccctagcacggcatatgttgtgctgaccagtgtgaatctcttcattggcatc
aatggcagtgtggccacctttgtcctggagctcttcaccaacaataaactcaaggacatc
aatgacatcctgaagtctgtcttccttatcttccctcacttctgcctgggccgcggactc
attgacatggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcgg
tttgtgtcccctctgtcatgggacctggtgggaaggaacctctttgctatggcagtagaa
ggtgtggtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtgtatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatccctcctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaggaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaa
ctgctgacagggcgagagcacttggagttctttgcactcttgagaggtgttccagagaaa
gaagtctgcaaggtaaatgaaacaccacaggacccacccccatga
DBGET
integrated database retrieval system
