KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121338028
Entry
121338028         CDS       T07590                                 
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121338028 (SMARCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otc03021]
    121338028 (SMARCC1)
   03036 Chromosome and associated proteins [BR:otc03036]
    121338028 (SMARCC1)
Transcription machinery [BR:otc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     121338028 (SMARCC1)
Chromosome and associated proteins [BR:otc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    121338028 (SMARCC1)
   PBAF complex
    121338028 (SMARCC1)
   GBAF(ncBAF) complex
    121338028 (SMARCC1)
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM SWIRM-assoc_2 SWIRM-assoc_3 Chromo BRCT DUF919 BRCT_2 SpeFL
Other DBs
NCBI-GeneID: 121338028
NCBI-ProteinID: XP_041264505
LinkDB
Position
Unknown
AA seq 906 aa
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSVDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHASEIEAEIEDAPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSLDAGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEPQDVSRCVSCPTEEFSR
VREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPEEPDKMDGAEEEKMETE
AEGQPAEKVESKAESEPEEGEKVPEGESERSADKEPESDDKEPKTEEKEAEENKENVDGS
KDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMK
KLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQHSQT
PQQPHQHPSGPGINPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHPPQPGQLPGPGSMLPG
RMMPAGMHGGSGPAPPGMAPLPGNLLGPRVPLAAPNGMYPGPAQPPPPAEGVTPPPAGAP
PASAAP
NT seq 2721 nt   +upstreamnt  +downstreamnt
atggatttcaaagctggaggtacattgtgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccggatggaccggaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaag
cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccacgtgtatccaagt
cctacctcagtggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctacgacacctgggtccatgccagcgaaatc
gaggcggaaattgaggacgcgccgatccccgagaagccgtggaaggttcatgccaagtgg
attctggacacggatgtgttcaatgagtggatgaatgaggaggattatgaggtggatgag
aacaggaaatccgtgagctttcgccagaggatctccatgaagaatgaggagcccgtgagg
agccccgagaggagggacaggaaagcagcagccagcaccaggaagaggaaacactcccct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaagggcaagcagct
ctctatggcaaaaggagggggcagaaggaggaggatgagcaggaggatctcaccaaggac
atggaggatcccaccccagtacccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtgaaaggaggaaccgtggcagacctggatgag
caggatgaggagacagtggccactggaggaaaggaggacgaggaccccaacaagggcgac
cagagccgctcgctggacgcgggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgcatccacgtgattgaacgtcgtgcg
cttccagaattcttcaatgggaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccggctgaacccgcaggagtacctgaccagcacagcc
tgcaggaggaacctcaccggggacgtctgcgctgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcccgagagccgccccatggccatggggccc
cccccgaccccccacttcaacgtgctggccgacaccccctcggggctgatgccgctgcac
atccgcaccccgcaggttccagctgcccagcagatgctgagcttccctgagaaaaacaag
gagaagccaactgacctgcagaactttggccttcgcacagacatctactccaaaaagact
ctggctaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg
ctgttagagccccaggacgtctcacgttgtgtgtcatgtcccacagaggagttctcccgg
gtcagagaggaggtgcccctggagctggtggaggcccacgtgaagaaggtgcaggaagca
gctcgagcctctgggaaggtggatcccacctacggcctggagagcagctgcatcgcgggc
accggccccgaggagcccgacaagatggatggagctgaggaggagaagatggaaacggag
gcagaggggcagccagcagagaaggtggagagcaaggctgagagcgagcctgaggagggg
gagaaggtcccggagggggagagcgagcgcagcgccgacaaggagcccgagagcgacgac
aaggagcccaagacagaggaaaaggaggcagaggagaacaaggagaacgttgatggcagc
aaggacaaagaggccgaggctgggaagaagaaagtggagcacgagatctcggaaggaaac
gtggccacagctgcagctgctgccttggcctctgctgccaccaaagccaagcacctggca
gctgtggaggagaggaagatcaagtccctggtggcccttctggtggagactcagatgaag
aagctggagataaagcttcgccactttgaggagctggaaaccatcatggaccgggagaaa
gaggcactggagcagcagaggcagcagctgctgacagagaggcagaacttccacatggag
cagctcaagtacgccgagttaagggctcgccagcaaatggagcagcagcacagccagacc
ccccagcagccccaccagcaccccagcgggcctggcatcaaccccctgggggcaccagca
cacccagggctgctgccccaccagcagcccccaccctaccccatgatgcaccaccagatg
ccacctcctcacccacctcagccaggtcagctgccggggccgggctccatgctgccgggc
cggatgatgcctgcgggcatgcacggggggagcgggccggccccgcccgggatggccccg
ctgcccgggaacctgctgggaccgcgtgtgccgctggcagcccccaacggaatgtacccc
ggcccggcgcagcctccgccacctgcagaaggagtgactccccccccggccggagccccg
ccggcctcagccgctccctaa

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