Onychostruthus taczanowskii (white-rumped snowfinch): 121338480
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Entry
121338480 CDS
T07590
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121338480 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otc03041
]
121338480 (DDX5)
03009 Ribosome biogenesis [BR:
otc03009
]
121338480 (DDX5)
Enzymes [BR:
otc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121338480 (DDX5)
Spliceosome [BR:
otc03041
]
Complex A
U1 snRNP components
U1 related factors
121338480 (DDX5)
Complex B
121338480 (DDX5)
Ribosome biogenesis [BR:
otc03009
]
Eukaryotic type
Pre-60S particles
Helicases
121338480 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
121338480
NCBI-ProteinID:
XP_041265450
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGGNPTGAYQNGYEQQYGSNIASMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgttttggaggaagt
agaggtggacctctctctgggaagaaatttggaaaccctggggagaaacttacaaaaaag
aaatggaacttggatgagctgcccaaatttgagaagaacttctaccaagaacatccggat
gtagttagacgtactgcgcaagaagttgaacagtacagagcaagcaaagaggtcacagtt
aggggccataactgtccaaaaccaattatcaacttttatgaagcaaacttccctgcaaac
gttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcacaaggt
tggccagttgcactgagtggattggatatggttggagtggcacagactggatcagggaaa
acactctcttacttactgcctgccattgtgcatataaatcatcagccattcctggagcga
ggagatggacctatttgtcttgtgttggcaccaacccgtgaactggcccaacaagtgcag
caggtagctgcagagtacagcagagcatgtcgtttgaagtccacgtgtatttatggaggt
gctccaaagggaccacaaatccgtgacctggaaagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttagaagctggaaagaccaatctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaa
attgtggatcagataagacctgacaggcagactctgatgtggagtgccacatggccgaag
gaagtgaggcagctggctgaagatttcttgaaagaatatgtgcacatcaacattggtgca
ctggaactgagtgcaaaccacaacattcttcagattgtggatgtgtgtcacgatgtcgag
aaagatgacaagcttattcgtttgatggaagaaatcatgagcgagaaggaaaacaaaaca
attgtttttgtggaaaccaaaaggcgttgtgatgatctcaccagaaaaatgaggagagat
gggtggccagcgatgggtattcacggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgccacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagctggttgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgcgctaggcaagagagacttcggagcaaaaacc
caaaacggggcttacagcgcccagagtttcagcaatggaactccctttgggaacggcttt
gcagctgcaggcatgcaggccggcttcagggccggcggtaaccccacaggagcgtaccag
aacggctacgagcagcagtacggcagtaacattgccagcatgcacaatggcatgaaccag
cagcagtacgcctaccctgccactggtgccgctcctatgataggttaccccatgcccaca
agttattctcaataa
DBGET
integrated database retrieval system
