Onychostruthus taczanowskii (white-rumped snowfinch): 121338539
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Entry
121338539 CDS
T07590
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otc01001
]
121338539 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otc04121
]
121338539 (TRIM28)
Enzymes [BR:
otc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121338539 (TRIM28)
Protein kinases [BR:
otc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
121338539 (TRIM28)
Ubiquitin system [BR:
otc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121338539 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_5
zf-RING_UBOX
ANCHR-like_BBOX
PHD
zf-RING_2
Collagen
zf-C3HC4
zf-B_box_Trim66
Motif
Other DBs
NCBI-GeneID:
121338539
NCBI-ProteinID:
XP_041265564
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MSVLQPAALGTGPGAKGAELPEPLGLLELCGACRERLSPQREPRLLPCLHSVCRACLGAA
PGAAPSDGSVTGSTGVTGITGRYWDHWGYWGALGLLGSLGLLGIGPFAFTCRGRLPALSF
PPSPLLLLPRAVNLRQSPPSCPPIGSSPCQSVSAGGDWPRRGAGAGAGGRAECEGDAAAM
SVLQPAALGTGPGAKGAELPEPLGLLELCGACRERLSPQREPRLLPCLHSVCRACLGAAP
GAAPSDGSVFECPVCHQQCPLGDIMENLFLQASTAATATSGQSCTSCEDNAAATSFCLEC
AEPLCDTCVEAHLRVRDTREHSVQPLGSPAVPGAGSGSGPCPGPCPAHPRQPLSLFCGAC
DALTCRECHLGPHRQHPIRRGTDAQKRLQVEVKLAILQIMKELNKRAKALVGDVQRVTEG
RQERLERQRRALSRAQRLQEHALRFGARALHGPHGAALLLSRRLVRDPWDPRAGGGTWAP
GAPRAAGGAPLPVGPAGMDQECPELRRGWQVTPPRDVPTPRDVHSPPRCPRRDLRDILGV
PPPEPPVMSPPPDVLQGHPQATVVTGGQVTPELLLQGPPQLSPPPQLSPPLRLSPPPLEP
AAAPSPELATSPENGVTGERMRNPSSSPQEEKLVKKLLIKRRGPPEAQDSPRLPKQPRVS
LERLELDLELDPAQPPVFRIFPGPSAQEFSLIVIEQGSAGTEGTAGTEGTAGTEGTPGTE
GTAGTPGTEGTAGTAQPHGALLVKEEQQESPIGDTGDSGDTKPVGLLPPALGEPGPAPGS
SPGLGLPVVPVVPGGLPGVSCCRVCGQAGAVVMCDRCQRCFHLHCHLPALHDVPSPEWTC
LLCQELPPPLLEPEQGPSLKLSPQDQQRCEFVLLELLCHEPCRPLQRLCSSPDGRDAMDL
TLMRARLQEKLSPHYRSPEEFARDGWRLLRQFHRLTEDKADVQSILELQRFLESRLSAVF
GDQKFSRLLLDPEEALEVSPGS
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgctgcagccggcggcgctcgggaccggccccggggccaagggcgcggagctg
ccggagccgctggggctgctggagctctgcggcgcctgccgggagcgcctgagcccccag
cgcgagccgcggctgctgccctgcctgcactccgtgtgccgcgcctgcctcggcgccgcg
ccgggagcggcccccagcgacgggagcgttactgggagcactggggttacggggatcact
gggcgttactgggatcattggggttactggggggcactggggttactgggatcattgggg
ttactgggaattggcccattcgcgttcacatgccgggggcgtcttcccgccctttctttc
ccgccttctcctctcctattgctcccgcgcgctgtcaatctccgccaatccccgccctcc
tgccctcccattggttcctcgccctgtcaatctgtctcagcgggcggtgattggccgcgc
cgcggggcgggggcgggagcaggaggccgtgcagagtgtgagggggacgccgccgccatg
tcggtgctgcagccggcggcgctcgggaccggccccggggccaagggcgcggagctgccg
gagccgctggggctgctggagctctgcggcgcctgccgggagcgcctgagcccccagcgc
gagccgcggctgctgccctgcctgcactccgtgtgccgcgcctgcctcggcgccgcgccg
ggagcggcccccagcgacgggagcgtgttcgagtgccccgtgtgccaccagcagtgtccc
ctgggtgacatcatggagaacctcttcctgcaggccagcacggccgccacagccaccagc
gggcagagctgcaccagctgcgaggacaacgcggcggccaccagcttctgcctggagtgc
gccgagccgctgtgtgacacctgcgtggaggcacacctgagggtcagggacacccgggag
cacagcgtgcagcccctcggctctcccgccgtgcccggtgccgggtcgggttcggggccg
tgcccggggccgtgcccggcgcaccctcggcagccgctgtcgctgttctgcggcgcctgt
gacgccctcacgtgccgcgagtgtcacctgggcccgcaccgccagcaccccatccgccgc
gggacggacgcgcagaagcgcctgcaggtggaggtgaagctcgccatcctgcagatcatg
aaggagctcaacaaacgcgccaaggcgctggtgggcgacgtccagcgcgtcaccgagggc
cggcaggagcggctggagcggcagcggcgcgcgctgagccgggcgcagcggctgcaggag
cacgcgctgcgcttcggggcccgcgcgctgcacggcccccacggcgccgccctgctgctc
tccaggaggctggtgagggacccctgggacccccgggctgggggtggcacttgggcccct
ggagctcccagagccgcagggggagctccgcttccagtgggacctgcagggatggaccag
gagtgcccagagcttcggagggggtggcaagtgacacccccccgtgatgtccccaccccc
cgtgatgtccactcccctccccgatgtcctcgcagggacctgagggacattctgggggtg
ccacccccggagccccccgtgatgtcccctccccctgatgtcctgcagggccacccccag
gccacggtggtcactgggggacaggtgacaccggagctgctcctgcagggtcccccccag
ctgtcacctcccccgcagctgtcacctcccctccggctgtcacctccccccctggagcca
gcggcagccccgagccccgagctggccaccagccctgaaaacggcgtcactggagagagg
atgaggaaccccagcagttccccccaggaggagaagctcgttaagaagctgctcattaag
cggaggggcccccccgaggcccaggacagcccccggctccccaagcagccgcgggtgagc
ctggagcgcctggagctggacctggagctggacccggcgcagccacccgtgttccgcatc
ttcccgggaccctcggcccaggagttcagcctcatcgtcatcgagcagggctcagcgggg
acagaggggacagcagggacagaggggacagcggggacagaagggacaccggggacagaa
gggacagcggggacaccagggacagaagggacagcggggacagcgcagccacacggagcc
ctccttgtcaaggaggagcagcaggagtcgcccattggggacaccggggacagcggggac
accaaacccgtagggctgctgccccctgccctgggggagccgggccctgccccgggctcc
tcccctggcctggggctcccggtggtcccggtggtcccgggggggctcccgggggtctcg
tgctgccgcgtgtgcggccaggccggggccgtggtgatgtgtgaccgctgccagcgctgc
ttccacctgcactgccacctgcccgcgctgcacgacgtgcccagccccgagtggacgtgt
ttgctgtgccaggagctgcccccgcccctcctggagccggagcagggcccctccctcaag
ctgagcccccaggaccagcagcgctgcgagttcgtcctgctggagctgctgtgccacgag
ccctgccggcccctgcagcgcctctgcagctccccggacggccgcgacgccatggacctg
acgctgatgcgggcgcggctgcaggagaagctgagcccccactaccgcagccccgaggag
ttcgcccgcgacggctggcgcctgctgcggcagttccaccgcctcaccgaggacaaggca
gatgtccagtccatcctggagctgcagcgtttcctcgagagccgcctcagcgctgtcttc
ggcgaccagaagttctccaggctcctgctggatcccgaggaagccctggaggtgtctcca
ggctcctga
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