Onychostruthus taczanowskii (white-rumped snowfinch): 121339086
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Entry
121339086 CDS
T07590
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121339086 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121339086 (RIMS1)
Membrane trafficking [BR:
otc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121339086 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
121339086 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
121339086
NCBI-ProteinID:
XP_041266514
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLNCIVRD
QAQPSLCRTPGTKTLPHKPNANFSGQCVPVPHKPHSEEGQPERNWRLHQQFESYKEQVRK
IGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKV
VMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGASSDAPREKKARLQERS
RSQTPLSTAAASSQEISSSSVQPDRRKGAEVSQPAMGPDQKQASRSRSEPPKERKKAVLV
SDQNGKGVKSERKRVPKSSLQKEGPTDDRERKERHEGRRLEKGKSQDYPDLPEKREEGKV
PDDDKQRKEDEYHTRYKSDPNLARYPVKPHPEEQQMRMHAKVSKARHERRHSDVALPHTE
MEEAEVPENKLGKRSQLQGTQDRKSLVETQRSYSIDRTGDVRISVSKQLTNHSPPTPRHS
PVPIEHIEYKNHDSFIKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQSESVRPSPPK
PHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYYWLDPATWHSR
ETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTELGRLGAFI
TKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGH
FHQFHSLNSLRRLYKYYYDIPRIPETSHPPLESSSSSFESQKMERPSISVISPTSPGALR
DAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKR
RTKTVKKSLEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETA
LLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGGESTSKKLQRSRPISDSDISDFDVD
DGIGVVPPVGYRSSTRESKSTTLTVPEQQRTTTHHRSRSVSPHRGDDQGRPRSRLPNVPL
QRSLDEIHQMRRSRSPTRHHDASRTAVDYRSREMDSQYLSDQESELLMLPRAKRGRSAEC
LHTIRSSVRHYKTLPPKMPLLENGTHWNLYSSTLPACAKTKPVIRQDISLLHDCLNLRIS
KFGDDLLVSELQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQH
ASPEDDRTRTLESCIPKQDSVDHLSAKPGAAQRQSRKVERYSSQKQARKGPAAEAERTHQ
QGSPTQSLPADTSFSSRRGRQLPRVPVRSGSIEQEQENFNSSTKASLVVEERTRQMKMKV
HRYNQTSGSGSSQEHEREQYTKYNIQTDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRL
SSTSFMSEQSERPRGRISTFTPKMQGRRMGTSGRITKSTSVSGEMYKLEHIDGSQSDTAV
GMVGTGGKKRRSSFSAKVVAIVSRRSRSTSQLSQTEAGSKKLKSTIQRSTETGMAAEMRS
RMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAM
GDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKT
LDPLYQQTLVFEESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSVVIGWYKLF
PPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacatcatcatggcagtgatg
gaccggcagaaagaggaggaagaaaaagaagaggccatgctcaactgtattgttagggac
caggcccagccatcactctgtagaaccccaggtaccaaaaccttgccacacaaacccaat
gcaaacttctctgggcaatgtgtgccagtgcctcacaaacctcacagtgaagaagggcag
ccagagaggaattggaggttgcatcaacaatttgaaagctataaagagcaagtaagaaag
ataggggaagaagcccgccgttaccagggagagcacaaggatgatgctccaacatgtgga
atctgtcataaaacaaagtttgcagatggttgtggccatttatgctcttattgccggacc
aagttctgtgctcggtgtggaggtcgtgtctctctgcgatcaaacaatgaggacaaagtg
gttatgtgggtatgcaatttatgtcgaaagcaacaagaaatcctaacgaaatctggagcg
tggttttttggaagcggaccacagccgtcgcccagtcaggacggaacgctgagtgatacg
gcgacgggcgcgagctcggatgcacccagagaaaagaaagcaagacttcaagagcgatcg
aggtcacagactcccctaagtacagcagctgcctcatcacaggaaatctcttcttccagt
gtgcagcctgaccgtaggaaaggagcagaagtgtcgcagccagctatgggcccggaccaa
aagcaagcttcaaggtctagaagtgaacctccaaaggagaggaagaaggcagtattggtt
tctgaccagaatggcaaaggtgtaaagagtgagcgtaagcgtgtgccaaaatcctcactt
caaaaagaaggaccaacagatgacagggagcgtaaagagcggcatgaaggtagaaggctg
gagaaaggcaagtcacaggattacccagacttgccagagaaacgtgaggaaggcaaagtg
cctgatgatgacaaacaaaggaaggaagatgaatatcatacccgttacaagagtgacccc
aatctggcaagataccctgtaaaaccacaccctgaggagcagcagatgcgcatgcacgcc
aaagtttctaaagcacgacacgagagaagacacagtgatgtagctttgccacacacagaa
atggaggaagcggaggtacctgagaataaattaggaaaacgctcacaattacagggaact
caggacagaaaatctcttgtggaaactcagaggtcgtactctatagacagaacaggtgat
gtaagaatttctgtttctaaacaattaactaatcatagcccaccaactcccaggcatagt
ccagttcctatagaacacatagaatacaagaaccacgattcctttataaaacagagccgc
cttgatcctagctctgctattctcatgcgaaaagcaaagcgggagaaaatggagaccatg
ctaaggaatgattcccttagctctgaccagtcggaatcagtgcggccatcccctccaaag
cctcatagagcaaaaagaggcggaaagaaaaggcagatgtcagttagtagctcagaggaa
gaaggggcatcaacaccagaatatactagctgtgaagatgtggagatagaaagtgaaagt
gtcagtgaaaaaggtgacttggattattactggctggatcctgccacgtggcacagcagg
gagacgtcccctattagctcgcatcccgtaacgtggcagccttccaaagagggagaccgc
ttaattgggcgtgttattcttaacaagagaacaaccatgcccaaagaatcaggtgcatta
ctggggctaaaagttgttggaggaaaaatgacagaattaggacgactcggtgccttcatt
accaaagtgaagaaaggtagcttggctgatgtggtggggcatctcagagcaggggatgaa
gttctagaatggaatggtaaacccttgcctggagctacaaatgaagaagtttacaacatt
attttagaatcaaaatcagaacctcaagttgaaatcattgtttcaaggcctattggacat
tttcatcagtttcattctctgaactccttgagacgtttatataaatattactatgatatt
ccacggattcctgagacttcccaccccccattagagtctagttcaagttcttttgaatct
cagaagatggaaaggccttctatttctgttatatctccaactagccctggagccctacgg
gatgcacctcaggtcctaccagggcagctttctgttaaactctggtatgacaaagtggga
catcagttaatagtaaatgttctgcaggcaacagatttgccaccaagagtagatggacgc
cccagaaatccctatgtaaaaatgtattttcttccagacagaagtgataaaagtaaaaga
aggaccaaaacagtaaagaaaagtctagagccaaaatggaatcaaacttttctctactca
catgtacatcgtagagattttagagaacgaatgcttgaaatcacagtatgggatcagcca
agagtacaagaagaagagagtgaatttcttggagagattcttatagagctggagacagca
cttttagatgatgaaccacattggtataagctacagacacatgatgaatcttcactacct
ctgcctcagccatcaccattcatgccaagaagacatgttcatggtggagagagcactagc
aaaaaattacaaagatctcggccaatcagtgatagtgacatctcagattttgatgttgat
gatggtattggagttgttcctccagtaggttataggtctagtactagagaaagtaaatcc
acaacgctaactgtgccagagcagcaaagaacaacgacgcatcatcgttcacgttccgtg
tctcctcaccgtggtgacgatcagggcaggccccgttcacgtttaccaaatgtgccatta
cagaggagtttagatgaaattcatcagatgagaagatcacgttctccaactagacaccat
gatgcctccagaactgcagttgattacagatccagagagatggatagtcagtatttgtct
gatcaagaaagtgagcttcttatgctgcccagagcaaagcgaggaagaagtgcagagtgc
ctacacaccatcagaagttctgttaggcactataaaacattaccacccaagatgccttta
ctagaaaatggtactcattggaacctatacagctcaactcttcctgcatgtgctaagacc
aaacccgtgattagacaggatatttcactccttcatgattgccttaacttacgaatatcg
aaatttggagatgatctactggttagtgaactgcagccctcccttgacagggctaggagt
gctagtaccaactgcttgagaccagatactagtttgcattcaccagaacgagaaaggggt
agatggtccccctccctagagaggagacgacctactagtcccaggattcatatccagcat
gcatctccggaggatgacagaacaaggacgctggagtcttgcattccaaaacaggacagt
gtagaccacctaagtgctaaacctggagcagcacagaggcagtccagaaaagtggaaaga
tatagcagccaaaaacaagctaggaaaggccctgcagctgaagcagaaagaacacatcag
caaggaagtcccacgcagtctcttcctgcagacacctcgttcagcagtcgtaggggaaga
cagctaccacgagttccagtaagaagtggcagtatagagcaagagcaagagaattttaac
tcttccacaaaagcaagcttagtagtggaggagcgaacgagacagatgaaaatgaaagtg
caccgttataatcagacatcagggtctggttctagccaagaacatgagcgtgagcaatat
accaagtataatatacaaacagatcagtacagaagttgtgataacgtctctgccaaatca
tcagatagtgatgtcagtgacgtgtcagccatttcccgaaccagcagtgcctctcgcctc
agcagcacaagttttatgtcagagcaatctgagcgccctcggggcaggatcagtacattt
actcctaaaatgcaaggcagacggatggggacttcagggaggatcacaaagagcacaagt
gtgagcggagagatgtacaagctggagcacattgacgggagccagtcggacacggccgtc
ggcatggttggaacaggtgggaagaaaaggcgttccagctttagtgccaaggtggttgcc
atagtgtctcgaaggagcagaagcacatctcaacttagccaaacagaggctggcagcaag
aagctaaagagcacgatacagagaagcacagaaacaggaatggcagcagagatgagaagt
cgtatggttcgacagccaagtcgagaatccactgacggcagcataaatagttatagctct
gagggcaatttaatatttcctggagtacggttgggtgctgacagtcagttcagtgatttc
ctcgatggactgggacctgcacagttagtaggccgacaaacactagcaacccctgccatg
ggtgacatccagattggaatggtggataaaaaaggccagttagaagtagaagtcattaga
gcccgtggcctcacacaaaaacctggctccaaatctaccccagctccatatgttaaagtg
tatttactggaaaatggagcatgtatagctaagaagaagacaagaattgcaaggaagacg
cttgatcctctgtaccaacagacactggtttttgaggaaagtccacagggtaaagtcctt
caggtaatagtctggggagactatggccgaatggaccacaaatgcttcatgggagttgcc
cagatccttctggaggaattggatctgtccagcgtggtaataggctggtataaattattt
ccaccttcatcgcttgtggatccaacattgactcccctgacacgtagggcttcccagtca
tctctggaaagttcaactgggcctccctgcattagatcatag
DBGET
integrated database retrieval system
