Onychostruthus taczanowskii (white-rumped snowfinch): 121339120
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Entry
121339120 CDS
T07590
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121339120 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121339120 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121339120 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otc00535
]
121339120 (COL9A1)
Proteoglycans [BR:
otc00535
]
Extracellular matrix (ECM) proteoglycans
Others
121339120 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
121339120
NCBI-ProteinID:
XP_041266608
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MKSHWKITAFFYLCSFLWSFISATIQHQSRLPAILGASHRIDICPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIERVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVHLNGQMKSVEFSYKGADGRHQTASFLHLPFLFDSQW
HKLMIIVEANSVTLFIDCIKIESLNIKPKGKINTDGFAVLGKLKNNPQISVPFEIQWMVI
HCDPLRPQREGCGELPARVTQTGIERGPPGPPGPPGPPGPPGVPGIDGIDGERGPKGPPG
SPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGAPGPKGQKGEPGLPGARGLPGKGLVGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGLPGPPGPPGTIGLQDGDLLCPSACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGEPGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGFPGSPGMKGIPGPKGNKGPPGVPGLMGN
PGKQGQQGPEGEAGPTGPRGPPGSRGETGPAGPPGLPGKLGPQGSIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDSGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSEGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKASYGREGRDGDRGVPGVAGQPGVPGPPGPPGPPGYCE
PASCRMQAGQRAGKNMKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccactggaaaattacagctttcttttacctgtgtagttttctgtggtctttc
atctcagccaccatccagcaccaatcaagactaccagctattctgggtgccagtcacaga
attgatatctgcccaacaatcaggattggccaagatgacctaccaggttttgacctgatt
tctcagtttcaaatagaaaaagctgcttcccaaggaattatcgagagagtagtgggatcc
acttctctacaagtagcttataaattgggacccaatgtagacttcaggataccaaccagt
gccatatattccaacggcttgcctgatgaatattcctttctaaccacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaggattcttcgggaaaagaa
caagttggagtgcatctcaatggtcaaatgaaaagtgttgagttttcttataaaggagca
gatggaagacaccaaacagcatcatttttacatttgcctttcttgtttgactcccaatgg
cacaagcttatgataattgtggaagcaaacagtgtcacactttttatagactgtattaaa
atagaatccttaaacataaaaccaaaagggaaaatcaacactgatggctttgctgttctt
ggaaaacttaaaaataatcctcaaatttcagttccgttcgagatccagtggatggtgatc
cactgcgaccccctgcgaccccagcgcgaaggctgtggcgagctgccagctcgggtaacc
cagacgggaatcgagagaggcccccctggtccaccaggccccccaggtccaccagggcca
ccaggagttcccggtattgatggcattgatggggagagaggcccgaagggcccccctggt
tcaccgggtccagatggggatgcaggcaaaccaggatcccctgggctgcctggagagccg
ggagctgatggattcacaggacctgatggctctcgtggagccccaggaccaaaaggacag
aagggggagccaggactgccaggtgctcgtggacttccaggcaaggggcttgttgggcca
cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga
gatccaggaaaaagagggccaccagggctaccaggacctccaggtcctccaggaacgatt
ggcctgcaagatggtgacttgttgtgtcccagtgcttgtcctcctggccgcccaggacat
gctggcttaatgggtatgaaggggcaaaaaggttcaaaaggagagtctggtgaaccagga
aaacaaggttataagggtgaagaaggggaccaaggacctagtggtgaagtgggagctcaa
ggccctccaggcattctaggtatcagaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtggtcttgatggtgatcctggtccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccactaggagaggcaggtccaaagggagaaaggggtcctcaa
ggtacaagaggaataaatggcctccctggacctaaaggagagcctggtttaccaggagtt
gatggccgtgaagggatcccaggcatgcctggagctaaaggtgaaccaggaaaacctgga
gctccaggtgatgcagggctccagggattgccaggtttcccaggctctccaggtatgaaa
ggcattcctggcccaaagggtaataaaggtcctcctggggtgccagggttaatgggaaat
cctggtaaacagggtcagcagggcccagagggagaagcaggtccaacaggaccccgggga
ccaccaggtagcagaggggagacaggtcctgcaggtcctccaggtttaccagggaagttg
ggtccccagggtagtattggacttcctggactgcctggtcctccaggccttcctggtggt
aaaggtgaccggggttcggtgggtgaaccaggacctaagggtgaacaaggtgcccctgga
gcagaaggagatggaggagaaaagggtgacttaggtgacatgggattaccaggagcaaag
ggagctgttggtaatcccggagactctggttcccgcgggcctgagggaagtcggggactg
cctggcatggaagggccacgtggctcacctggaccacgaggcttgcagggtgagcagggt
gctccaggcctgcctggcagtgaaggtccagctggaaaagaaccaagcgatcagcacatt
aagcaggtttgcatgagagtcatgcaagaacaattagctcagctggcagccagccttagg
aggccagaatttggtgctccgggtcttcctggccgaccagggccaccaggtgctccagga
cctgctggtgaaaatggtttcccaggacagcttggcccccgtggtctgcctggccttaaa
ggtccccctggtgagattggtcgtaaaggtccgaaaggtgagccaggagaaagaggagaa
agaggatttccaggcagaggactgaaaggttatcctggaccaagaggtcttccaggtgaa
ccaggcaaagccagctacggcagggagggccgtgacggtgaccgaggtgtccctggggtg
gccgggcagccgggggttcccggtccccccggcccgcccggccctcccgggtactgcgag
cccgcgtcctgcaggatgcaggcgggacagagagccgggaagaacatgaaagggccctga
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