Onychostruthus taczanowskii (white-rumped snowfinch): 121339705
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Entry
121339705 CDS
T07590
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04518
Integrin signaling
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121339705 (COL6A3)
04518 Integrin signaling
121339705 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121339705 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121339705 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otc04147
]
121339705 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
otc00536
]
121339705 (COL6A3)
Exosome [BR:
otc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121339705 (COL6A3)
Glycosaminoglycan binding proteins [BR:
otc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121339705 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
121339705 (COL6A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
vWA_SIBA-E
Ig_J
Motif
Other DBs
NCBI-GeneID:
121339705
NCBI-ProteinID:
XP_041267645
LinkDB
All DBs
Position
Unknown
AA seq
3005 aa
AA seq
DB search
MRKHRHLPLVAMFCLLLSGFGSVGAQQQAAQESADLIFLIDGSNNIGGVNFPAIRDFLVN
LIETLRVGAQQIHIGVVQYSDQPRTEFALNSYSTKADVLDAVKALGFRGGEEANTGAALE
FVVENLFTQAGGSRIEEAVPQILVLISGGESSDDIREGLLAVKQAGIFSFSIGVLNADSA
ELQQIATDGSFAYTALDIRNLDALQELLLPNIVGVAQRLILLAAPTIVTEVIEVNKKDIV
FLIDGSTALGAAPFNAIRDFVAKIVQRLEVGPDLIQVAVAQYADTVKPEFYFNTHQTRKD
VMANVRKMKLMGGTALNTGSALDFVRNNFFTSAAGCRMEEGVLPMLVLITGGKSRDAVDQ
AAAEMKRNRIVTLAVGSRNADLAELQEIAHERDFVFNPNDFRLQFMQAVLPEVLSPIRTL
SGGPIVPEPPSVQVTKRDIIFLLDGSLNVGNANFPFVRDFVATLVNNLDVGSDKMRVGLV
QFSDTPKTEFSLYSYQTKSDIIQRLGQLRPKGGSVLNTGSALNFVLSNHFTEAGGSRINE
QVPQVLVLVTAGSSADPFLQVSNELARAGVLTFAVGVRNADQAELEQIAFNPRMVYFVDD
FSALAALPQELNKPITTYVSGGVEEVPLAPTESKKDVLFLIDGSANLLGSFPAVRDFVHK
VISDLNVGSDATRVAVAQFSDTVQVEFDFAEYSSKQDMLVKVKRMKIKTGKQLNIGAALD
EAIRRLFVKEAGSRIEEGVPQFLILLVAGRSTDDVEEPSDVLKHAGVVTFGIKAKNADPV
ELERIVYAPQFLLNVESLQRISELQPSIVNLLRTVQLQPTVVERGEKKDVVFLIDGSDGV
RRGFPLLKTFVQRVVESLDIGRDKVRVAVAQYSNTIQPEFLLDTHEDKADIISAIQQLKL
MGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGT
VPFGIGIGNADLTELQTISFLPDFAISVPDFSQLDSVQQVVSNRVIRLTKQEIESLAPDL
VFTSPSPAGVKRDVVFLVDGSRSAAQEFYLVRDLIGRIVNNLDVGIDTTRISVVQFSEHP
HVEFLLNTHSTKDEVQNAVRQLRSKGGQLVNVGEALEFVAKTIFTRPSGSRIEEGVPQFL
VILSSRKSDDDFEYPSLQVKQVGVAPMMIAKNVDTEEMIQISLSPEYVFQVSSFQELPSL
EQKLLTPIETLTVDQIRRLLGDVQPPIDVSGDEKDIVFLIDSSDSVRPDGLAHIRDFISR
IVQQLEVGPNKVRIGVVQFSNGVFPEFYLKTHKSKNSVLEAIRRLRLRGGSPLNAGKALD
FVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDDVDRPARVITSTNIKPLGVGARNVDRD
QLQVITNDPGRVLVVQDFTGLSTLEKRVQNILDELPIPTTDSPGPFLPGGKKQADIVFLL
DGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQVGLAQYNSDVTDEFFLKDHSTKAQILD
AINKVIYKGGRVANTGAAIRHIQERHFVKEAGSRIDQRVPQIAFIVTGGKSTDDGPKASL
EITQKGVKVFAVGVRNIDLKEVSLLASESAMSFRAATAQELSELNEQVLVTLEAAMEERL
CPGTTDVTRDCDLEVIIGFDVSDVGPGQNIFSSQRGLESRVESVLNRITQMQKISCTGNQ
APNVRVAIMAQAQGGPVEGLDFSEYQPELLERFLDMRTRGPYYLRADTLRSYLSKFRSSP
AGSTKVIIHFTDGVDEPINQLEAASSTLHSEGVNALIFVGLDRVTNFDRVMQLEFGRGFT
YNRPLRVNLLDLDFELAEQLDNIAERTCCKVPCKCSGQRGDRGVPGPIGPKGVTGDLGYG
GYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKGSRGFPGEKGELGEMGLDGIDGEEGDK
GLPGSSGEKGYSGRRGDKGVKGERGERGDRGLRGDPGESGADNTQRGPRGQKGEIGPMGD
PGPAGLEGQEGEVGRRGMAGRRGPIGVKGTTGSPGQPGPAGEQGMRGPQGPPGQVGTPGI
RGEQGVPGPRAGSGPPGPPGERGRIGPLGRKGEPGNPGPKGPNGQPGPRGEMGDDGRDGI
GGPGPKGRKGERGFVGYAGPKGGPGDRGVAGGPGPKGNRGRRGNAGVPGTPGQKGEIGYP
GPSGLKGEKGESRDQCALVRNIKDKCPCCYGPKECPVFPTELAFAIDTSSGVVREVFNRM
KQTVLRVVNNLTIAESNCPRGARVALVTYNNEVTTEIRFADARKKSSLLQQIQNFQATLT
TKPRSLETAMSFVARNTFKRARSGFLMRKVAVFFSNGDTRASPQLNDAVLKLYDAGVVPV
FLTSRQDAVLARALEINNTAVGHAIVLPTSGGQLNQTIQRLLTCHICLDVCDPHPSCAGT
GQRPGFRDRRAAPTDVDTDIAFILDSSESTTPLQFSEMRKYISHIVTNLEISSEPKVSQH
HARVAVLQQAPYEHETNSSFPPVKTEFSLTDYASKEKIINYLHNQMTQLQGTRALGSAIE
HTIAHVFENVPSPRDLKVIVLMMTGKVNKKELEHLQRAVINAKCKGYFFVVLGIGRKVNA
KNLYSLASEPNDVFFKLVDKPGELHEEPLLRFGTLLPSFIRSEFAFYLSPEIRKQCEWLQ
NGQQVQSQHPVLIGQKAVFVAPNATASRTFTASTTVSATIKPVASAHARTTPASTTAQAR
APETTSASPVAPGNATAQGAASATTHTKARASSNATAAVAGGRRRHSAKTHDIQITDVTE
SSARLRWASPEPHSTFDVTVTLAHDQSLVQRQNLTGTEHVIRGLRSGQKYVVVITGYQKS
QPKVTYTGSFSTKTLAQSQVPLANMMLNTEPLEGPENDWPDPCLLDFDMGMQCKDYQIVW
FFDSKHKFCSQGWYGGCGGNANRFETEAECYNKCLKPSADEKAMQQPPLEKRLSSVMDIC
RLQKDEGTCRNFVLKWYYDPETKSCARFWYGGCGGNENRFNTQKECEKLCSPGAINPGAV
TTMGT
NT seq
9018 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgcccctcgtggcaatgttttgcctcctgctctcaggcttt
ggctcggttggtgctcagcagcaagcagctcaagagtccgctgacctaattttccttatt
gatggatcaaacaacatcggaggtgtcaattttccagccatacgcgatttccttgtaaat
ttgattgaaaccctgagagttggagctcagcagatacacattggggtggtgcagtatagt
gatcaacccagaaccgagttcgctttgaacagctactccacaaaagcggatgtcctggat
gccgtgaaggcactcggattccgcgggggcgaggaagcgaacaccggtgcggcactggag
tttgtggtggagaacctcttcacccaggcgggaggcagcaggatagaggaagcggtgcct
cagattttagtgctgataagtggtggagagtctagtgatgatatccgagagggcttgtta
gcggtgaagcaagctggtatattttcgtttagcattggggtcctgaatgctgacagtgca
gagctgcagcagattgctactgatggaagcttcgcctatactgccctggatatccgtaac
cttgatgctcttcaagaattattactgcccaacattgttggagtggcccaaaggctcatt
ttgttagcggccccaaccattgtgactgaagttattgaagtgaacaagaaggatatagtc
ttcctgatagatggctcaactgctttgggggccgccccctttaacgcaattcgtgatttc
gttgccaaaattgtccaaaggctggaggttggacccgacctgatccaagtggcggtggca
cagtacgcagacactgtgaagccagagttttattttaacacccaccagaccaggaaggat
gtgatggccaatgtgaggaagatgaagctcatgggtggcacggcactcaacactggctca
gcactggactttgtgaggaacaacttcttcaccagtgctgctgggtgcaggatggaggaa
ggggtgctccccatgctggtgctcatcactgggggtaagtccagggatgctgttgaccaa
gctgcagcagagatgaagaggaacaggatagtgacccttgccgttgggtcgagaaacgct
gacctggcagagcttcaagaaattgctcatgaacgagattttgtgttcaacccgaacgac
ttccgccttcagttcatgcaagccgttcttcctgaagtactgtcacctatccggacactc
tctggaggaccgatcgtcccagagccaccctcagttcaagtaaccaaaagggatatcatc
tttcttttggatggatcactcaacgtcggaaatgccaacttcccctttgtgcgggacttt
gttgccaccctagttaacaaccttgatgtcggcagtgacaaaatgcgagttggcttagtg
caatttagcgacactcccaaaaccgagttctccctgtactcctaccaaaccaaatctgac
ataatccagcgcttggggcagctgaggcccaagggggggtcggtgctgaacaccggctcc
gcactgaactttgtgctctcgaatcacttcacggaggccggtgggagcaggataaatgaa
caagtgccccaggtgctagtcctggtgacagcagggagctctgccgatcccttcctccaa
gtttccaatgaattagctcgggccggagtgctgacctttgctgttggcgttaggaatgcg
gatcaggcagaacttgaacagattgcctttaatccaagaatggtgtattttgtggatgat
ttcagtgctctggcagctttaccccaggagttaaataagcctataacaacatatgttagt
ggaggtgtggaagaggttccactcgccccaacagaaagcaagaaggatgttttattcctg
attgatggctcagccaacctcttgggcagctttcctgccgtccgggattttgtgcacaaa
gtaatttctgacctgaacgtgggctccgatgccacgcgagtcgctgtagctcagttcagt
gacaccgttcaagttgaatttgactttgctgaatactcatccaagcaagatatgcttgtc
aaagtgaaaaggatgaagataaaaactgggaagcagctgaacattggagctgcacttgac
gaggctataaggaggctgtttgtgaaggaagctggaagcaggatcgaagaaggcgttcct
cagtttttgattctccttgttgctgggagatcaaccgacgatgtggaggagccatcagat
gttctgaagcatgctggagtggtaacctttggtatcaaagccaaaaatgctgacccagta
gagctggaaaggattgtttacgccccgcaattcctcctgaacgtcgaatccctccagcgg
atttcagagcttcagccaagcatagtcaacctgctgagaacagtccagcttcagccaaca
gtagttgagagaggtgagaagaaagatgtggtgtttctgatcgatggctcagatggtgtc
agaagaggtttccctctgctgaagacgtttgtccaaagagttgttgagagcctggacatt
ggccgcgacaaggtgcgcgtggctgtggcgcagtacagcaacaccatacagcctgagttc
ttgctggacacccacgaggacaaagcagatatcatcagtgccatccagcagctgaagctc
atgggagggtctcccctgaacacgggggcagccctcgactacctcatcaagaacgtgttc
acggtgtcaagcggcagcaggatagcggagggcgtcccgcagttcctgatcctgctgact
gctgaccggtcccaggacgatgtcaggaggccctcagtggtcctgaagacaagtggcacg
gtgccctttggcattgggatcggaaatgctgacctcacagagctgcagaccatttccttc
ctcccagattttgctatctctgtgcccgacttcagccagctggactcggtgcagcaagtc
gtctccaacagagtcatccggctgaccaagcaagagatagaatctcttgcccctgacctg
gtttttacatcacccagcccagcgggtgtgaagagggacgtcgtgttcctggttgacggc
tcccgctccgccgcccaggagttctacctcgtccgcgacctcatcgggaggatcgtgaac
aacctggacgtgggcatcgacaccaccaggatttcggtggtccagttcagcgagcatccc
cacgtggagttcctgctcaacacccactccaccaaggacgaggtgcagaacgccgtgagg
cagctgaggtccaaaggtggccagctggtgaacgtgggggaggccctggagtttgtggcc
aagaccatcttcacccggccctccgggagccgcatagaggagggcgtcccgcagttcttg
gtcatcctctcctcccgcaagtccgacgatgactttgagtatccatccctccaagtcaag
caagtgggggtggcacctatgatgatagcaaagaatgtggatactgaagagatgatacag
atttcccttagtcctgaatatgtattccaagtctccagcttccaggaactgcccagcctc
gagcagaagctgctgactccaattgaaaccctgactgtggaccaaatcaggcggctgctg
ggagatgtgcagccccctatagatgtttctggagatgaaaaggacatagtcttcctcatt
gacagctctgacagcgttcggccggatgggcttgctcatattcgggatttcatcagcaga
attgtccagcagctggaagtggggccaaacaaagtgcggattggggtggtgcagttcagc
aatggtgtcttccccgagttctacttgaagacccacaagtccaaaaattccgtcctggaa
gccatccgccgcttgaggcttagaggtgggtcccccctgaacgctggcaaagccctggac
ttcgtagtgaagaactacttcatcaagtctgcggggagcaggatagaagatggagtgccc
cagcacctggtggtcatccttggagaccggtcccaggatgacgtggacagacctgccaga
gtgatcacttccacaaacatcaaacctctgggtgtcggagccaggaatgtggacagggac
cagctgcaggtcattaccaatgatcctgggcgtgtgcttgtggtacaggacttcacagga
ctctcaaccttagaaaagagggtgcagaacattcttgatgagctcccaatacctacaaca
gactcacctggaccattcttacctggaggcaaaaagcaggctgacattgtgtttttgctg
gatggctccatcaatctggggagagataacttccaagaagtcctccagtttgtctactcc
gtggtggatgccatttacagggatggcgactctatccaggtaggactggcccagtacaac
tcggatgtcactgacgagtttttcctcaaggaccactccaccaaagctcagattttagat
gctattaacaaagtcatttacaaaggcgggcgcgtggcgaacaccggcgcggccatcagg
cacatccaggaaagacactttgtgaaggaggccggcagcaggattgaccagagggtgccc
cagatcgccttcatcgtcacgggtgggaagtctacagatgatgggccaaaggcatccttg
gaaatcacgcagaaaggtgtcaaggtgttcgcagtcggagtgaggaacattgacctgaag
gaagtcagcctgttggccagtgagagcgccatgagtttcagagcagccacagctcaggag
ctgtcagagctgaatgagcaggtcctggtcacgctggaagctgccatggaggagagattg
tgcccaggaacaacagatgtgacaagagactgtgacttagaagtgataattggcttcgac
gtcagtgatgtggggcccggtcaaaacatcttcagttcccagcgaggcctggagtcgaga
gtggagtctgtgctgaacaggataacccagatgcagaagatcagctgcactggcaaccag
gcacccaacgtcagggtggccatcatggcccaggcccagggggggcccgtggaggggctg
gacttctccgagtaccaacctgagctcttggagaggttcctggacatgcggacccgcggg
ccctactacctcagggcagacacactgaggtcctacctcagcaaattccggtcctcgccc
gctggcagcaccaaggtcataatccattttactgatggtgtagatgagccaataaatcag
ctggaggctgcttcgtctactttacactcagaaggagtcaacgctctcatcttcgtcggg
ctggacagagtgaccaactttgacagagtgatgcagctggagtttggccgtggcttcacc
tacaacagaccactcagagttaacctgctggacttggattttgagctggcagagcagctt
gacaacatcgcagagaggacgtgctgcaaggtcccctgcaagtgctcagggcagagaggg
gacagaggtgtgccaggccctataggaccaaagggtgtcacaggggatcttggctacgga
ggctaccctggtgatgaaggaggaccgggtgagcgtggaccaccgggtgtgaatgggaca
caaggtttccagggatgccctgggcacagaggaacaaaggggtctcggggattcccagga
gagaagggtgaactgggagaaatgggtctggatggcattgatggagaagagggagacaag
ggtttgcctggctcctctggagagaagggatattctggcaggaggggagataagggagtt
aagggtgaacgaggggaacgaggcgaccgtgggctccgtggagatccgggagagtcagga
gctgataatactcaacggggccccagaggacaaaagggtgaaattggaccaatgggagat
cctggaccagcagggctggagggccaagaaggtgaagtgggaaggaggggcatggcagga
cgaaggggacccataggagtaaagggcaccacgggctcgcctggtcagccagggccagct
ggagagcaaggcatgcgagggccacagggtccccctggccaggttggcacaccaggcatc
agaggagagcagggtgtccctggacccagggctgggagtggacctccaggacccccagga
gaacgtggcaggattggtcccctgggaagaaagggtgagcctggaaaccctggacccaaa
gggccgaacggacagccaggcccacgaggagagatgggtgatgatggacgagatggaatt
ggtggcccaggtcctaaaggcaggaagggagaacgtggcttcgtaggttacgcagggcca
aagggtggacctggtgaccgtggtgttgctggaggccccggccccaaaggaaacagaggc
cgcagaggaaatgcaggagtacctgggacacctggtcagaagggagagatcggataccct
gggccatctggccttaaaggcgagaaaggagaatccagagatcaatgtgccctggtgcgg
aacatcaaagacaaatgcccttgctgctacggtcccaaggagtgccctgtcttcccaacc
gagctggcctttgctattgacacctcctctggtgtcgtgagggaggttttcaacaggatg
aagcaaactgtgctcagagtggtcaacaacttaaccattgctgagagcaactgtccccgg
ggggcacgggtggccctcgtcacctacaacaatgaggtcaccaccgagatccgctttgct
gatgccaggaagaaatccagcctcctccagcagatccaaaacttccaggcaacgctgacc
acaaagccacgcagtctggagactgccatgtccttcgtggccaggaataccttcaagcgt
gcccgcagtggcttcctgatgaggaaggtggctgtcttcttcagcaacggggacaccagg
gcgtccccgcagctcaacgatgctgtgctgaagctctacgacgccggggttgtgccggtg
ttcctcaccagcaggcaggatgcagttcttgcaagagctctggagatcaacaacacagcc
gttggtcacgccattgttcttccaaccagtggcggtcagctgaatcaaaccatccagagg
cttttgacctgtcacatttgtttggatgtgtgtgacccccatcccagctgtgctggaact
ggccagagacctgggttccgagacagaagggcagcccccaccgacgtggacacggacata
gccttcatcctggacagctccgagtccaccacccccctgcagttcagtgagatgaggaag
tacatttcccacattgtaactaacctggaaatcagctcagagccaaaagtatcccagcac
catgccagagtggccgttctccagcaagctccttacgaacacgaaacaaactcaagcttc
ccaccagtaaaaactgagttctcactaactgattatgcgtccaaagagaagatcattaat
tacctccacaatcaaatgacccagctccagggcacgagggctctgggaagtgcaattgaa
cacacaatcgctcatgtcttcgaaaatgtgccgagccctcgggatctaaaagtcatagtt
ctgatgatgactggaaaagtgaacaaaaaagaactcgagcacctgcagagggctgtcatc
aatgcaaaatgcaaagggtacttctttgttgtcttgggcatcggcaggaaggtgaatgcc
aagaacctctacagccttgccagcgagccaaacgacgtgttcttcaagctggttgataaa
ccaggagagctccatgaagagcccttgctgcgttttgggacactgctgccatcctttatc
agaagtgaatttgctttctacctgtctccagagataaggaaacagtgtgagtggctccag
aatggtcagcaagtccagagccagcaccccgtgctcatcgggcagaaagcagtgttcgtg
gcccccaacgcaaccgccagccggaccttcaccgccagcaccacggtcagcgcaaccatc
aagccagtggcgagtgcccatgccagaaccactcctgccagcaccacggcccaggccaga
gcccccgagaccacctcagccagccccgtggccccggggaacgccactgcccagggagca
gctagtgccaccacccacaccaaagccagggccagcagcaacgccacagccgccgtggcc
ggtggcaggaggagacacagcgcaaagacccacgacatccagatcacagatgtcactgag
agcagtgccaggctgcgctgggccagccccgagccccacagcacctttgatgtcactgtc
accttggcacacgaccagtccctcgtgcagaggcaaaacctgaccggcaccgagcacgtg
atccgagggctccggagcgggcagaaatacgtcgtcgtcatcactggctaccaaaaatcc
cagcccaaagtaacttacacaggctcattcagcacgaagaccctggcgcagtcccaggtg
cccctggccaacatgatgctcaacactgagccactggaagggcctgagaatgattggcca
gacccttgcttgctggactttgacatgggcatgcagtgcaaggactatcagattgtgtgg
ttctttgactccaaacacaagttctgcagccagggttggtatggtggctgtggaggtaat
gccaatagatttgagaccgaagctgagtgctataacaaatgcttaaagccatcagcagat
gagaaagccatgcagcagccaccccttgagaaaagattatcatcagtcatggatatctgc
cggctgcagaaggacgagggcacctgcaggaactttgtgctgaagtggtactacgacccc
gagaccaagagctgcgcccgcttctggtacggcggctgcggcggcaacgagaacaggttc
aacacgcagaaagaatgtgaaaaactctgctcccctggtgccatcaaccccggcgcggtg
acgacgatggggacatag
DBGET
integrated database retrieval system
