Onychostruthus taczanowskii (white-rumped snowfinch): 121339912
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Entry
121339912 CDS
T07590
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otc04515
]
121339912 (PCDH18)
Cell adhesion molecules [BR:
otc04515
]
Cadherins
Protocadherins
121339912 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Syndecan
SusE
G1_gp67_N
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
121339912
NCBI-ProteinID:
XP_041268078
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MYRIDGKMHFLFIFALMIISCNNAVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKMPN
PSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHTYSLSAND
FFSIDVRTRTDGAKYAELIVVKELDRELKSTYELQLTASDKGVPQRSGSSLLKISISDSN
DNSPVFQQQSYIIQLLENSPIGTLLIDLNATDPDEGANGKVVYSFSSHVSAKIIETFRID
PEKGYLTLLKQVDYEVTKSYEIDAQAQDMGPNSIPAHCKIIIKVVDVNDNKPEINLNLMS
TEREEVACISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYILTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVVILENNSP
GAYITSVTATDPDLGDNGQVTYTILENSVLGSSITTYVTIDPSNGAIYALRTFDHEEVNQ
IAFMVQARDGGTQQLISNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDAEIGFLVT
RIRATDRDSGMNSELSCSIAADKENSIFVMDPQTCDISINVSVETVPAKQWEFLVIVQDK
GSPQLSTKALLKCTILEHVYSFSSTEATLVSQPSLDISMITIISLGSICAVLLVIMVIFA
TRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPSS
SPALERGQMSSRQSHHSHQSLNSLVTISSNHVPESFSLELTHATPAVEVSQLLSMLHQGQ
YQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPIDRLLGEGFS
DLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQSPQQHLQ
QQQHHQGLEEDAQAADTSEKKKSFSTFGKDCQSEEDSGDTCTSSLLSEMSSVFQRLLPPS
LDAYTECNEIDRSNSLERRKGHLPAKNVNYPPGVAAWAASTHFQNPANNGPALGTHSGAQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaatcgacggtaaaatgcactttttattcatttttgcactgatgataatatct
tgcaataatgctgtgctgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatcagtaatagcaagactatcggaggatgttgctgatgttttattaaaaatgcctaac
ccttcctcagttcggtttcgagccatgcagaggggaaattctcccttgcttgtagtccgt
gaggataatggagaaatcagcataggagctaaaattgatcgggaacaactgtgccagaaa
aacttaaactgctccatagagtttgatgtgattactctgcccactgaacatctgcagctt
ttccatgttgaagttgaagtgctggacattaatgacaactctccgcagttttccagagct
ctgattcctattgagatatcagagagtgcagctgtaggaactcggatccctttggacagt
gcttttgatccagatgtgggagacaactcccttcacacttactccctttctgcaaacgat
ttttttagcattgatgtgagaaccaggactgatggtgctaagtatgcagagctgattgtg
gtcaaagagctggatcgcgagttgaaatcgacttacgaactccaactcactgcctctgac
aaaggggtgcctcagagatctgggtcatccctccttaaaatcagcatttctgattccaat
gacaacagccctgtctttcagcagcagtcatatattatccagctcttggaaaactcccct
attgggactttgctcatagacctcaatgctactgatccagatgagggcgccaatgggaag
gttgtgtactcctttagcagccatgtgtctgccaaaattatagaaacttttaggatagac
ccagaaaaaggttacctgaccctgctgaagcaagtggactatgaagtaaccaaatcctat
gaaattgacgctcaggctcaggatatggggccaaattctattccagctcactgcaaaatt
ataattaaagttgtggatgtgaatgacaacaagccagaaatcaacttaaatctgatgtcc
acagaaagagaagaggtagcttgcatttctgaggggtcacccctggacacttttgttgcc
ctggtcagagtgcaagataaggactctggtgtgaatggagagatcgtttgtaagctccat
gggcatggccactttaaacttcaaaagacctatgaaaataactatttaatcttaactaat
gccactctagatagggaaaagagatctgaatacatcttgactgtaatagcagaggacaag
ggaacaccaagtctctccacagtgaaacactttactgtccaaatcagtgatgaaaatgac
aacccaccccgcttccagacaaacagatatgaagttgttatcttggaaaataactctcct
ggagcatacatcacatcagtcacagccacagacccagatctaggtgacaatgggcaggtg
acatacactattttggaaaactcagttttgggaagttctataaccacctatgtgaccatt
gatccctccaatggggcaatctatgccctgcgaacctttgatcatgaagaagtaaatcaa
attgccttcatggtgcaagctagggatggagggacccaacagctcattagcaacaccacg
gttgtactcaccatcattgatgaaaatgacaacgctcccgtcatcgtggggccagcacta
cgcaacagcacagcagaaatctcaatccctaaagatgctgaaattggctttcttgtcacc
aggataagggctacagacagagactctggtatgaactctgaactcagctgctccatagca
gctgacaaggaaaacagcatctttgtgatggatccccaaacttgtgacatctctatcaat
gtgagtgttgaaacagttccagcaaaacagtgggagtttttggtaatagtccaggataaa
ggcagccctcagcttagtacgaaagctcttctgaaatgtaccattttggagcatgtttat
tcattttcaagcaccgaagcaactttggtaagccagccctccctcgacatctccatgata
actattatatccttaggatctatatgtgccgtgttattggttattatggttatctttgct
acgaggtgcaatcgagagaaaaaggacaccaggtcttacaactgtcgcgtggccgaatca
acctaccagcaccatccaaaacgtccctccaggcagatccacaaaggggacatcactctg
gtgccaacagttaatggcactctacccatcaggtctcaccacagagcttcgccatcatca
tccccagccctggagaggggtcaaatgagcagccggcagagccaccacagccaccaatca
ctgaacagcctggtgaccatctcctcgaaccatgtgcctgaaagtttctccctggaactc
acccatgctactccagctgtcgaggtttcccagcttctctcgatgcttcatcagggccag
tatcaaccgagaccaagttttcgaggaaacaaatattcccgaagctacagatatgcccta
caagatatggataaattcagcttgaaagacagtggccggggtgatagtgaagctggagac
agtgattatgatttgggaagagagtctccaattgacagacttcttggggaaggattcagt
gaccttttccttacagatggaagaattcctgcagcaatgcgcctgtgcacggaggagtgc
agggtcctgggccactccgatcagtgctggatgccgccgctgccctctccctcttctgac
tacagaagcaacatgttcatccctggggaggagttccagtcaccccagcagcacctgcag
cagcagcagcatcaccagggcctcgaggaggatgcccaggcagctgacaccagtgagaag
aagaagagcttttcaacatttggaaaggactgccagagtgaggaggactcaggggacacc
tgcacctcctccctcctctctgaaatgagcagtgtcttccagcgcctgctgcctccctcg
ttggacgcctacacggagtgcaatgagatagatcgctccaactcgttggagcgcaggaag
ggacatttgccagccaagaatgtaaattatccaccaggggtggcagcctgggcagccagc
acacatttccaaaaccctgccaacaacgggcccgctctagggactcactcgggcgcgcag
ccttcgtccaaatggctgccagccatggaggagatcccggagaattatgaagaggatgat
tttgacaatgtgctcaaccacctcagcgatggcaaacatgaactcatggatgccagtgag
ctggtggcagaaattaacaagctgctacaagatgtccggcagaactag
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