Onychostruthus taczanowskii (white-rumped snowfinch): 121339930
Help
Entry
121339930 CDS
T07590
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121339930 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otc03019
]
121339930 (PATL1)
Messenger RNA biogenesis [BR:
otc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121339930 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
121339930 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
121339930
NCBI-ProteinID:
XP_041268119
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MFRYPSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEDKA
GSSREPDGPVGNDGDVLGDPEDALAERLTRLVIDSELEDPAIMQAVHTRGPPQQPGGLNS
SIWDSSAVLRRIRGPLLAQEMPSVSVLDYALPQRPPQARDEERDPSERALPRRSSSPIIG
SPPVRAIPIGTPPKQAAVPNFNQQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNVPNS
SLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQGRV
GQMMSPAGGFRAFFGAPPAPPPSQLPHPPGPGSHLQNLRPQPQMFRPDTTHLHPQHRRLL
HQRQQQNRNQHRSLNGSGGDRGGHRSSHQEQIRKDPYANLMLQREKDWVSKIQMMQLQST
DPYLDDYYYQNYFQKLEKLAAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGK
LTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYL
LSLEGERPALMGERKQKICDMYDNLRGKAPGQDRPSDDHFMQIMCIRKGKRLVARILPFL
APEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNLPQ
SAAAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDTNAELMQDNQWTELMLMATRELL
RIPQGALAKPVSIPSNLISLFSRYVDQQKLNLLETKLHLVQGIR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttccggtacccgtccctggaggactgcccgctggacgaggatgaagatgctttccag
gccctgggggaggaggatgaagacatcgaccagttcaacgacgacaccttcggggccggg
gccgtcgatgatgactggcaggaggcccacgagcggctggcggagctggaggacaaggcc
ggctcgagccgggagccggacggtcccgttgggaacgacggggacgttctgggcgatccc
gaggacgcgctggccgagcggctcacgcgcctcgtcatcgacagcgagctggaggacccg
gccatcatgcaggccgtgcacaccaggggtcccccgcagcagcctggagggctgaattcc
agcatctgggacagttcggccgtgctgcggcgcatccgggggccgctcctcgctcaggag
atgccatcagtgtccgtgctggattatgccctgccccagaggcctccgcaggctcgggac
gaggagcgggatccatcggagcgggcgctgccccggcgctcctcctcccccatcatcggg
agccccccggtgcgggccattcccatcggcacccccccaaaacaggccgccgtcccaaac
ttcaaccagcagatcctgtgtcccaagcctgtccacatccgagctaccatgcagcagcgt
tatcccgctccctatggagagaggatgtcccccaaccagctctgcaatgttccgaattcc
tccctcctgggccacccgttcccccacagcgtctctccggttctcacacacctgcagaga
gcccagctgctcggaggagcccaggccggccgaatgtcccccagccagtttgcccgggtg
tccgggctggtggggagcccgctgccctcggtgaatcccaagctgctccagggcagagtt
gggcagatgatgtccccggccggagggttccgtgcctttttcggggctccccccgccccg
cccccctcgcagctgccgcaccctccgggccccggatcccacctgcagaacctgaggccg
cagccccagatgttccggccggacacgacccacctgcacccccagcaccgccggctcctg
caccagcggcagcagcagaaccggaaccagcaccggagcctcaacggctccgggggggac
cgagggggccaccggagcagccatcaggagcagatccgtaaggatccctacgccaacctc
atgctgcagcgggaaaaggactgggtgtccaagatccagatgatgcagctgcagagcact
gatccctacctggatgattattattatcagaattacttccagaagctggagaagttggca
gcagccgaggaagtgcacggtgacggtccaaagaaggagcgcactaaactcatcacccct
caggtggccaagctggagcacacctacaagccagtgcagtttgagggctcgctgggaaag
ctcaccgtctccagtgtcaacaacccccggaagatgatcgacgccgtggtgacatcccgc
agcgaggatgatgagacgaaggagaagcaggttcgggataagaggcgacagacactcgtc
accatcgagaagacgtacagcctcctcctggacgtggaggactacgagcgccgctacctc
ctgagcctggaaggggagcggccagccctgatgggagagaggaagcagaagatctgtgac
atgtacgacaatctgagggggaaggcacctgggcaggacaggccgagcgatgaccacttc
atgcagatcatgtgcatccggaaaggaaagcgcctggtggcccggatccttcccttcctg
gctccagagcaagcggctgacgtgctcatggccacagccaggaacctgcccttcctcatc
aagaaggatgctcaggatgaggtgcttccctgcctcttgaggcccttttcccacgtcctt
taccaccttcccttgggaacagtcaccagccttgtgcagcagctcacgaacctacctcag
agcgccgccgctcccaccaacctgcacctcactgctgtgctccaaaacaagtttggtctg
tccctgctgtacctggtcctgagccgaggggaggaattgcagagctcggacacgaacgca
gagctgatgcaggacaaccaatggacggagctgatgctgatggcgacccgggagctcctg
cggatccctcagggagccctggcaaagcccgtgtccatcccctccaacctgatctccctc
ttctctcgctacgttgaccagcagaagctgaacctgctggagacgaaattgcacttagtg
caggggatccgatag
DBGET
integrated database retrieval system
