Onychostruthus taczanowskii (white-rumped snowfinch): 121340478
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Entry
121340478 CDS
T07590
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otc03036
]
121340478 (KDM1B)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121340478 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox_2
Pyr_redox
FAD_binding_3
HI0933_like
Pyr_redox_3
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
KARI_N
ThiF
NAD_binding_7
Shikimate_DH
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121340478
NCBI-ProteinID:
XP_041269202
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MSMGRVRTKKKACSSDQSPDSLPVRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKAYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNVTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGLI
NTGILSVSPDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGVKVIVLEAKDRIGGRVW
DDKTFTGVTVGRGAQIVNGCVNNPVALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNFPVQSID
YSGEEVQITTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDQQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSNDPWLQMAYSFVKTGGSGEAYDMI
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgggaagggttcgaacgaagaaaaaggcatgttcttcagatcagtctccagac
agccttccagtgaggagctctggaagacaggtgaagaagaaagcagctgaagcagcagat
gatgatgatgaagcgtcagagaagaaatatagaaagtgtgaaaaagctggatgcacagca
acatgtcctgtttgctttgccagtgcagcagaaagatgtgcaaaaaatgggtatacgtct
agatggtatcatttgtcctgtggggaacacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggttatgagaaatacactgcctggaaaaggatttggaccagcaat
ggtaaaagtgagcccagtccaaaagcctttatggctgatcaacagcttccttactgggtg
cagtgcacaaagccagaatgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaatagcaaaagcctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccaatgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtta
cctggtgaatccaaccttgtgaagttagagcacctaaagagtgtgcctaatgtgactgtt
gcaggcatgaacaagtatttccagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtgaggccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gaccctaccatgtacctggcattgagaaacttgattttggctttgtggtacacaaactgc
aaggaggctctcacccctcaaaaatgtatccatcatataattgttcgggggcttgtgcgg
atccgctgtgtacaggaaatggagaggatcctgtattttatgacaaggaaagggctaatt
aatacagggattttgtcagtcagccctgaccaataccttcttcctaaggaataccacaat
aaatctgttattattgttggggctggtgcagcaggattagcagcagcccgacaactgcac
aactttggagttaaggtcattgtcttagaagctaaagacagaattggtggccgagtgtgg
gatgacaagacgttcacaggagtcactgttggaagaggtgcacaaatcgtcaatggatgt
gtcaacaacccagtggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaaact
caacatcaagatgttcctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggtatccaattcagtgagctggaagaaaaagtactacagttccatctcagtaat
ttggaatatgcctgtggcagcaatctctctcaggtatccgcacgctcatgggaccacaat
gaattttttgcccagtttgctggagatcacactcttctaactgtgggatattcaactgtg
attgataagttggcagaagggctggacatccgactgaatttcccagttcagagtattgac
tattctggtgaagaagtgcagatcactactgcagatggaacagtgtggacaacacaaaag
gtactagtgactgtaccactggcccttcttcagaaaaatgccattcagtttaatcctcca
ctgtcagaaaaaaaaattaaagccattaatagtttgggagcgggagtcattgagaaaatt
gccttgcagtttccatatagattttgggacagtaaaattcaaggagctgatttttttggt
catgttccacccaattctagccaacgtgggctctttagtgtcttctatgacatggatcca
gagggcaaagaaagcattttaatgtccgtggtcaccggagatgctgtgacaaccattaag
aatttagatgaccaacaagtactgcaacagtgtatgactgtactccgagaactgtttaag
gagcaggaagttcctgacccagtgaagttttttgttactcgatggagcaatgacccttgg
ctgcagatggcgtacagctttgtgaaaaccgggggcagtggtgaagcttatgacatgatc
gctgaagacatacaaggaaaagttttttttgctggtgaggccacaaatcggcactttcct
cagaccgttacaggagcttacttgagtggagttcgagaagccagcaaaatagcagcattt
tga
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