Onychostruthus taczanowskii (white-rumped snowfinch): 121340701
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Entry
121340701 CDS
T07590
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otc03036
]
121340701 (TRERF1)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
121340701 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
Myb_DNA-bind_6
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
121340701
NCBI-ProteinID:
XP_041269564
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MGDQQLYKTNHTANNNENLYYEQHQMNSLPSLNHSYGTSVMDAPQASPLSPPFPQDSRDS
IALPVGSKSLGSMDTSRQSSWTHSGSGNHVPARNSLNNQSAMWSPLGQGESHDGYQYSYP
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTEPSMVDNSGDSALRQLL
SQKPAVEQQPVASTVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQAHVPQMQSQQLLPQQMQHLQQPQYYAQPQQGHQRLSLQEIQQQPPARQQRQCP
VQIAQYYQTQPVMQQLQQQQQQMQLPLPPYHREPDPKTMHEPHQYSQDPSHPVQLIQLGA
VPQYCFQDPHEQYRHLYPQSLLQQQQQDQQKQYLSESRVPSLNSHIGLTPPDTAEDPARQ
EINSVGNAVPHRTLLPPSGVHLNNKSSQQDSPSTTWPQQIQLSDGRLQPLSPEQSGQNRE
TLPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLSKEV
DGLAPIVMPVSVPVKLLSPEPSTQPSASTATVTDKPANSVSDDEMPVLVKMTYSPPCSPK
VANPCSSSETSKKPHPGAVKSEESFKPLQDKKKYRHRPEPLFIPPPSFNLSMSHSGATLY
QSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVLTSHTTSHAQLPLTPLT
PTPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLTEKDVHKAT
LVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHTLFEAKGDIMVALEKLLL
RKPVRLKCHPLSNYHYAGSDKWTHQERRLFKEAMSIYSKDFIFVQKMVKSKTVAQCVEYY
YTWKKILRLGRKHRTRLEKKRDECLTSGEEEVLEEDEDIEEDRKEEREMQKSPDPPAISL
VGPIDLPAVQGLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCTIPGTK
QKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGRVFFKIKSRNAHMKTHRQQEEQQ
RQKAQKAAVAAEMAATIARTTGPAGHSLIPLDHMSLVKHVENVGDIDDDVVPDLGDVMEE
NEVMDADLLLDDEDPDLLQDDAEL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagttgtacaaaactaatcatactgccaacaacaatgagaacttgtac
tacgaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgctccccaggcgtcccctctctcccctccatttccccaagattcaagggacagt
atagcgttgcctgtaggttcaaaaagtcttgggtcgatggatacatctagacaaagcagt
tggacacattctggctcaggaaaccatgtcccagcgaggaacagtttgaataatcaaagc
gcaatgtggagccccctcgggcagggggagtcccatgacggataccaatattcttacccg
caaccaagtgaaaaccgatcgcaaaaaattaccagtggggtcctgcacaaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggtt
ctgcacaccgagccttcgatggtggataattctggtgacagtgcgctcaggcagctgctg
tcccagaagccggcggttgagcaacaacccgtagcttccaccgtacagagataccaacca
gtgccacagcaaacgcaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcacttatcacagatgcagatgcat
tctgcgttccagcagggccaggcgcacgttccgcaaatgcagtcccagcagctcctaccg
caacagatgcagcacttgcagcagcctcagtactacgctcagccccagcagggacaccag
cggctctcgctccaggagatccagcagcagcctccggctcggcagcagcggcagtgtcca
gtgcagatcgctcagtattaccaaacacagcctgtcatgcagcagttacagcagcagcag
cagcagatgcaattgccgctccctccgtatcacagggaacctgatccaaagactatgcat
gagccacaccagtactctcaggatcccagtcatcctgtgcagcttatccagttgggagca
gtgcctcagtattgcttccaggatccccacgaacagtacaggcacttgtacccccagagt
ttactgcagcagcagcagcaagatcagcagaagcagtacctgagtgagagcagagtgcca
tccctgaactcccacattggcctcactccgccagataccgctgaggatcctgcacggcag
gagattaattccgtaggtaatgctgtccctcatcgaactcttttgccaccctctggagtt
catctgaacaacaaaagctctcagcaagactctcccagcaccacgtggcctcagcagata
caactgtcagatggcagactgcagccactgtccccagaacaaagtggccagaacagagaa
acacttcctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttgaaggaa
tttaagagtttgcctgctctaaatggtcacatgaggtcacacggaggagtaagagcatct
cctaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgtctaaagaggtg
gatggcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacctgag
cccagcacacagccctctgccagcactgccacagtcacagacaagcctgccaactctgtg
tcagatgacgagatgcccgttctcgtgaagatgacttactctccaccgtgcagtccaaaa
gtggccaacccctgctcatcctctgaaactagcaaaaaacctcatccaggtgctgtaaaa
tcggaagaaagcttcaaaccattgcaggacaagaagaagtatcggcacagacccgaacct
ctcttcatacctcctccttccttcaacctcagcatgtcccactcaggtgccactctgtac
cagagccagcttcgctctccccgtgttctgggggatcacctgctggaccggacacacgag
ctgcccccctacactccgccgccgatgctcagtcccgtccggcaagggtctggtctcttc
agcagtgttctcacttctcacaccacatcacatgctcagctgccacttactccactgaca
cccactccacgtgtgctcctgtgtcggtctaatagtattgatggaagtgtcattccggta
acgcctgggcctggagaacagactgttgaaccgcgaatcaatattgggtccaggttccag
gctgacattcctgagctgcaggacagattgctaacggagaaagatgtgcacaaggctact
ttggtttggaaaccatggccagaactggagaacaaagtcttccaacaaagagtggaagac
cttttaaatatgagctgttccagtgtgttacctggtggaggaactaactcagaatacgct
ttgcacactctctttgaagcaaaaggagatattatggttgctcttgaaaagctgctgttg
agaaagccagtgaggttgaagtgtcatcctttgtcaaattaccactatgccggctctgac
aaatggacacatcaagaaagaagattgttcaaagaggcaatgtccatctacagcaaagat
ttcatatttgtacagaaaatggttaagtctaagacagttgcacaatgtgtggaatactac
tatacctggaagaaaatcttgcgtttgggacgaaaacacagaacgcgcttagagaagaaa
agagatgaatgcttgacaagtggagaagaggaagtgttagaggaagatgaagatattgaa
gaagacagaaaggaagaaagggaaatgcagaagtcacctgatccaccagcaatctctctt
gttggacctatagatctacctgccgttcagggtctttcactgtcttcatcctccttcatc
tgtgaaatgccaaactgtggcgctgtgttcagttcccgacaagcgctgaatggccacgct
cgcattcacggaggtacaaaccaggtgacgaaaacacgctgcaccattcctggcacgaag
cagaaatctggtacgcagagcggatactgctccatcaagagctcacctgcccacagcaca
acaagcggcgagaccgacccaacgacaatttttccttgcaaggagtgtggcagggtcttt
ttcaaaatcaaaagccgcaatgctcatatgaagactcacagacaacaagaagaacagcaa
aggcagaaggctcagaaagctgctgtagcagcagaaatggcagccactattgcaagaact
actgggccagctgggcatagtttgatccccctggatcacatgagcttggttaaacatgtt
gaaaatgttggtgacattgatgatgatgttgttccggatctgggtgatgtcatggaagag
aatgaagtcatggatgctgacctcttactggatgatgaagatccagatctactgcaggat
gatgctgagttgtaa
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integrated database retrieval system
