Onychostruthus taczanowskii (white-rumped snowfinch): 121341105
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Entry
121341105 CDS
T07590
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04382
Cornified envelope formation
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04518
Integrin signaling
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121341105 (COL4A3)
04518 Integrin signaling
121341105 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121341105 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121341105 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121341105 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otc04147
]
121341105 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
otc00536
]
121341105 (COL4A3)
Exosome [BR:
otc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121341105 (COL4A3)
Glycosaminoglycan binding proteins [BR:
otc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121341105 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121341105
NCBI-ProteinID:
XP_041270266
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MAGGGCPGRLAPVLLLALLWPGRAAAENCVCKGKSPCFCDSTKGSKGEKGFPGVPGPPGQ
RGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGVPGIPGFSGPPGLPGEPGTVGPPGLPGV
PGCNGTKGDQGFPGPPGRRGAPGFPGAAGIKGEKGNPAEGYSQDYGAKGDPGLPGLPGLQ
GAQGAQGYPGELGPQGPPGPLGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPG
TVIVTLTGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGKEG
APGPPGLPGQKGEQGKPGLAGRQGAKGMKGNPGPPGACGRMEYYDYVVGEKGDEGPPGPP
GPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGAKGERGQTGLCRVGPPGLPGI
TGRPGSVGLPGPPGEPGRVTFGTGLPGLPGEPGCTGPPGPPGDTGMRGDDARVCTDCSYI
PGMPGLPGSPGSRGQDGMPGREGATGPKGSPGSPGTPGLPGAQGPPGFRGDQGRKGSKGE
PRYVRPEGPKGEQGDPGARGEKGRRGSSGFLGRPGSKGSKGSKGEEGLAGPKGDRGLPGL
PGRLGLPGEMGLPGLAGYGPQGVRGFKGSKGIPGPPGLAGEAGMKGETSRATPLPALPGP
QGPHGLPGPPGVPGGVGARGQPGDPGHSGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGPP
GCEGKTGDPGRAGNLGQPGQKGEPGMVIPGEPGRMGSPGGHGSPGLKGEGGLPGLPGLPG
HPGHDGDDGLRGDRGSPGVPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQGSKGN
LGAPGLSIPGIYGKPGEPGLIGLQGNMGLPGPKGQSGRPGISGLPGARGDPGVMGLLGIP
GPPGMVGRPGNPGIQGSPGFPGIKGRKGFLGEKGEPGDKGFPGPSETLVGIGDKGEQGLK
GVQGRMGVRGEKGDIGVQGPPGVDGSEGMPGPPGAKGFMGLPGIPGGQGFPGALGDKGDM
GIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDPGPPGVLG
SKGEKGSEGHPGLPGVPGPRGIRGETGGAGIPGLYGPRGDAGAKGCQGHPGQQGVPGPPG
AVGVPGKPGLVGERGTQGQDGMPGPPGVKGEPGLPGRGIPGFPGIPGRRGIKGDMGLPGF
PGPPGVKGHQGDQGPIGPPGLVGLPGFQGTTGMAITGQKGNRGIPGAHGRPGAPGFPGLP
GLSTLSVKGSKGVRGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGHPGFLGFPGVKG
EKGNQGPPGPQGAEGPRGPKGQQGPPGFSGKIFSIPGSKGPAGLPGIPGTPGDQGIQGIP
GLQGPKGVKGLPGRFGHPGHPGLPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPGTTTAD
PTRKGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFSTM
PFLFCSTNDVCSFASRNDYSYWLSTAVVMPPDMAPISGRALEPQISRCVVCEGAAMVIAV
HSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRTVPFIECHGRG
TCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGQLENIISRCQVCMKRPI
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggtagtaagggagaaaaaggctttcctggtgttccaggtccacctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
cttacaggcttagttggacccaaaggtataagaggagtcccaggaatacctggattttca
ggtcctccaggccttcctggtgaaccaggaactgttggtcctcctgggctcccaggtgtt
ccaggatgcaatggcacaaagggtgaccaaggatttccaggtcctccaggtcgaagaggt
gctccaggctttccaggagctgctggtatcaaaggagagaaggggaaccctgccgaggga
tatagccaagactatggtgcaaaaggtgatcctggattaccaggattgcctggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggacct
ttaggcatgccggggaaaccaggacctcctggacctaagggtcttatgggactgaaagtc
ataggagccaaaggaaggaagggtgacactgggttaactggaccccctggacctccagga
actgttattgtgacgttaactggaccagacaacatgacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggaccgccaggaccaatggggtttacggggccagttggtgattct
caaagcgaaaagggtgaccgaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccacctggcttaccgggacaaaagggtgaacagggcaagccaggactggct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccacctggagcttgtggtcga
atggagtattacgattatgtggttggtgaaaaaggggatgaaggaccccctggacctcca
ggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggagctgctggtagg
ccaggtgtgtcaagacctggtctgagaggtcctccaggatttcctgggccaaaaggagca
aaaggagagagaggacaaactggcttgtgtagagtaggccctccaggactgcctggtatt
actggcaggcctggttctgttggattgccaggtcctccaggagaaccaggcagagtaaca
tttggaactggcctgccaggacttcctggagagccagggtgtacaggacctccaggacct
ccgggggatactggcatgagaggtgatgatgctcgtgtgtgtactgattgtagctacatt
ccaggaatgcctggccttcctggttctcctgggtctcgtggtcaggatggcatgcctggt
agagaaggagcaacaggtccaaaaggttctccaggttctccaggaacaccaggacttcca
ggggctcaaggacctccaggttttagaggagatcaaggacgtaaaggatcaaaaggtgaa
ccaagatatgtacgtccagaagggccaaaaggtgagcaaggagatccaggagccagggga
gaaaaaggaagaagaggttcaagtggatttctgggaagacctggctctaaaggatccaaa
ggttctaaaggtgaagagggattggctggaccaaaaggagatagaggactacctggattg
cctggtagacttggtcttcccggagaaatgggacttcctggactggcaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatacctggaccacctggattagctgga
gaagcaggtatgaaaggagagaccagtagggcaactccattacctgctttgccaggacct
cagggaccacatggtttacctggacccccaggagtgcctggtggggttggagcaagaggt
cagccaggtgatccaggacattcaggaccaacgggtgacacaggctttccagggcttggg
tttcctgggaacccaggtccaaaaggagataaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagactggagatccaggccgagctggaaacctaggacaaccaggacaa
aagggtgagccaggcatggttattcctggagagccaggaagaatgggttcaccaggaggt
catggcagtcctggcttgaaaggtgaaggtggacttccaggactcccaggcctcccaggg
catcctgggcatgatggtgatgatggcctaagaggagatcgtggctcacctggagttcct
ggagacccaggttttccagggaaacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttcaaaaggaaac
ctgggtgctcctggattgagtatcccaggaatctatggaaagcctggggaacctggatta
ataggtcttcagggaaatatgggattacctggtcccaagggacaatctggaaggccagga
atctctggtttgccaggggcaaggggagatccaggagtaatgggactgttaggaattcct
ggaccccctggcatggttggaagaccaggcaaccctggtatccaaggttctcctggcttc
ccgggaataaagggaagaaaaggatttcttggagaaaaaggtgaaccaggtgataaaggt
tttcctggaccatctgagaccttggttggtattggggacaaaggagaacaaggtttaaaa
ggagttcaaggccgaatgggtgtaaggggagaaaaaggagacattggtgtgcaaggtcca
ccaggtgtggatgggtctgaaggaatgcctggtccaccaggagccaaaggatttatgggt
cttccagggattcctggaggacagggattcccaggtgcactcggagacaagggggacatg
ggaattccaggtccaaaaggccagaaaggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctccaggagaacctggtccaaagggagatccaggtcccccaggagttttgggc
agcaaaggagaaaagggctccgagggtcatccagggcttccaggagtaccaggaccacgt
gggatcagaggggaaactggaggtgcaggaatcccagggctgtatggaccccgtggagat
gctggtgctaaaggatgccagggccacccaggacagcagggagtcccaggccctcctggt
gctgttggagtccctggaaaacctggacttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggccccccaggagtaaagggagaaccaggactgccagggagagggattcct
ggttttccaggtattcctggacgtagaggaatcaaaggggacatgggactgcctggcttt
cctgggcctccaggtgtgaaaggtcatcagggagatcaaggacccattggacctcctggc
ttagtggggttacctggatttcaaggcaccacaggcatggcaatcactggccagaaaggg
aacagaggtattcctggtgcacatggacgaccaggtgctcctggttttccaggccttcct
ggcctttccactctcagcgtgaaaggaagcaaaggtgtccgaggggcggatggaattcca
gggccaaggggtccagctggtgacattggccctcctggtcccaaaggaatagaaggtcga
tcaggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcaaggacccccaggaccacaaggtgcagaagggccaaggggaccaaag
ggccagcaaggcccacctggattctctggaaaaatattctccatcccaggaagcaagggt
cctgcaggactgccaggaatcccaggaacaccaggtgatcaaggaattcaagggattcct
ggactacaaggacccaaaggtgtaaaaggtctaccagggcgttttggtcatccaggacat
ccaggattgcctggtccaaaaggagacaggggatttcccggacaaagaggacaacctgga
ctgattggctttccaggtctgcagggtttacctggatcaccaggtactaccactgctgat
ccaacaagaaaaggatttatctttacccggcatagtcagacaacaaagattccttcgtgc
ccacatgggacatcccagatctatgtcggctattcactgctttttgtacaaggaaatgaa
cgagcacatggacaagatcttgggacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgcagcaccaatgacgtttgtagcttcgcttctcgcaatgactactcc
tactggctgtccactgcagtggtgatgccaccagacatggcacccatttctggcagggca
ctagagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagcagtt
cacagccaaacaactgtagttcctgcatgtccagatggctggatgtctctctggaagggt
ttttcttttgttatgtacacaagtgccggctcagaggcttctggccaagcattggcatct
cctgggtcttgtctggaagaatttcggactgtccctttcatagagtgccatggcaggggg
acatgcaactactacacaaattcctacagtttctggttggcatcattaaatccaagaaga
atgttcaggagacccgtgccacagactttgaaagcaggacaactagagaatatcatcagt
cgttgtcaggtctgcatgaagagaccaatctaa
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integrated database retrieval system
