KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121341226
Entry
121341226         CDS       T07590                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03420  Nucleotide excision repair
otc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121341226 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121341226 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otc04121]
    121341226 (ERCC8)
   03400 DNA repair and recombination proteins [BR:otc03400]
    121341226 (ERCC8)
Ubiquitin system [BR:otc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121341226 (ERCC8)
DNA repair and recombination proteins [BR:otc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121341226 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD_LRWD1 NBCH_WD40 Beta-prop_IFT122_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_SCAP eIF2A Beta-prop_HPS5
Other DBs
NCBI-GeneID: 121341226
NCBI-ProteinID: XP_041270517
LinkDB
Position
Unknown
AA seq 399 aa
MLGLMAARQAGLDDPARLRRAERTRRVLSLELNKDRDVERVHGSGINSLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPSYTCKALFSVGRSHPDVHKFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADIFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSSSH
ILQGHRQEVLAVSWSPRHEYVLATGSADGRVKLWDVRRASGCLSTLDQYNGEKSKASSEA
ANTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKFAI
SCGCNPEFAFVPYGSTIAVYTVFTGELITMLRGHYSTVNCCVFQPHFQELYSGSKDCNIL
AWIPAPREPDPDDISEKSLLQQHVNPAYEDAWSSSDDEG
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgttggggctcatggctgctcgccaggccgggctggacgaccccgcgcggctgcgccgg
gccgagcgcacccggagggttttaagtttggaattaaataaagacagagatgtggaaaga
gtacacggaagcggtatcaacagccttgatattgagcctgttgagggaagatacatgtta
tctggtggatcggatggtgttattgtactttatgaccttgaaaacttgagcaggaaacca
agttacacatgtaaagcacttttttcagttggaaggagtcatcctgatgtacataaattc
agcgtggagacagtccagtggtatcctcatgacactggcatgtttacatcgagctcattt
gataaaaccttgaaaatatgggatacaaacactttacaacctgcagatatatttcacttt
gagggaactgtctatagccatcacatgtctccagttgctacaaagcattgtttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatccagttctcac
attctgcagggtcacagacaagaagtattggcagtgtcttggtccccacgtcatgaatat
gttttggcaacaggaagtgctgatggtagagtaaaattatgggatgtgaggagagcttct
ggatgtctgagtacgcttgatcagtacaatggagaaaagtccaaagcatcttctgaggca
gcaaacactgctcacaatgggagagttaatggtttatgctatacaaatgatggacttcac
ctgctaaccattggtacagatgatcggatgcgactctggaatagctccactggagaaaac
accttagtgaactatgggaaagtctgtaatgaaagtaggaaaggactcaaatttgctatc
tcttgtggctgtaatccagagtttgcctttgttccgtatggaagtaccattgctgtttat
acagttttcacaggagaactgataactatgcttagagggcattatagtactgtcaactgc
tgtgtatttcaacctcattttcaggaactttatagtggtagcaaagactgcaatatcctt
gcatggataccagctccacgagagccagatcctgatgatatttctgaaaagtctctgctt
caacaacatgtaaatccagcatatgaagacgcatggagcagcagtgatgatgaaggctga

DBGET integrated database retrieval system