KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121341288
Entry
121341288         CDS       T07590                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03022  Basal transcription factors
otc03420  Nucleotide excision repair
otc04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121341288 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121341288 (CDK7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121341288 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:otc01001]
    121341288 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otc03021]
    121341288 (CDK7)
   03019 Messenger RNA biogenesis [BR:otc03019]
    121341288 (CDK7)
   03400 DNA repair and recombination proteins [BR:otc03400]
    121341288 (CDK7)
Enzymes [BR:otc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     121341288 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     121341288 (CDK7)
Protein kinases [BR:otc01001]
 Serine/threonine kinases: CMGC group
  CDK family
   121341288 (CDK7)
Transcription machinery [BR:otc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121341288 (CDK7)
Messenger RNA biogenesis [BR:otc03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     121341288 (CDK7)
DNA repair and recombination proteins [BR:otc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121341288 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like ABC1 Seadorna_VP7 FTA2 Haspin_kinase RIO1 APH Pkinase_fungal Nodulin
Other DBs
NCBI-GeneID: 121341288
NCBI-ProteinID: XP_041270626
LinkDB
Position
Unknown
AA seq 364 aa
MDARARAKRYEKLDFLGEGQFATVFKAKDKTNNRIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHPNIIGLIDAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTL
QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMTS
LPDYVTFKPFPGMPLQHIFSAAGDDLLSLLQGFFTFNPSTRVTATQALKQKYFSNRPGPT
PGNQLPRPNCPAEAAKEQQNALLNLKRKRTEGIDQGYAGFWKMSKGQGFWKPLATYKNVR
RCGL
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggatgcgcgggcccgcgccaagcgctacgagaagctcgacttccttggggaggggcag
ttcgccaccgtttttaaagccaaggacaaaacgaacaaccgaatcgtggctattaagaag
attaaactgggtcatagatcagaagctaaagatggaatcaacaggactgccctcagggag
ataaaactgttacaggagctaagccatccaaatattattggtcttattgatgcatttgga
cacaagtctaatattagtctggtgtttgattttatggaaacagatttagaggttattata
aaggatacaagtattgtgctgacacagtctcacatcaaggcatatatgctgatgacactt
caaggattagaatatttacatcagcattggattctacacagggatcttaaaccaaataac
ttgttgctagatgaaaatggagttctaaaattggctgactttggcttggcaaaatctttt
ggaagcccaaacagagtttatacacaccaggtagtaacaaggtggtaccgagctccagaa
ctattgtttggggctagaatgtatggtgttggtgttgatatgtgggctgttggttgtatt
ttagccgaattgctcctcagagttccttttttgcctggagactctgatcttgaccagctg
acaaggatatttgaaacactgggcactccaacagaagaacaatggcctgggatgacaagt
cttccagattatgtcacatttaagccattccctggaatgccacttcagcatatcttcagt
gcagctggtgatgatctgctcagtcttcttcaaggctttttcacgtttaatccttccact
agagtaacagctactcaggcattgaaacagaagtatttcagtaaccgaccaggacccact
ccaggaaatcagctgccaagacccaactgtcctgctgaagctgcaaaggagcaacaaaat
gcacttttaaatttaaaaaggaaaagaacagaaggaatagatcaagggtatgctggattt
tggaagatgtccaaaggacagggcttctggaaacccttggctacttacaagaatgtgagg
agatgcggtctataa

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