KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121341655
Entry
121341655         CDS       T07590                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
  KO
K07573  exosome complex component CSL4
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121341655 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otc03019]
    121341655 (EXOSC1)
Messenger RNA biogenesis [BR:otc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     121341655 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     121341655 (EXOSC1)
SSDB
Motif
Pfam: ECR1_N EXOSC1
Other DBs
NCBI-GeneID: 121341655
NCBI-ProteinID: XP_041271284
LinkDB
Position
Unknown
AA seq 241 aa
MAPPARYCVPGERLCSTEEATAGSGTYTRHGFIFSSLAGCLERKNEDSELPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRSWREDIRATEKDKVEV
YKSFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGRGRTGSGLKQCSSLPQG
QLMKLPPSPHGGKQVWEGAALTYCAPGVQMVPISWCEMQCPRTHTKEFRKVARVQPQFLQ
T
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgcctcctgcacgttactgcgtccctggcgagcggctgtgcagcacggaggaggcc
acggctgggagcgggacctacactcgtcatggcttcatcttctcctcgctggctggctgc
ctggagagaaagaatgaggacagcgagctgcccgtggtgtcggtggtgagagacagcgag
tcccagctcctgcccaacgtgggggctgtggtgacatgcaaggtctgcagtattaactct
cgctttgccaaggtccacatcctgtatgttggctccacaccgctgaaatccaccttccga
ggcaccatacggtcctggagagaagacatccgagccacggagaaggataaggtagaagtg
tacaagagcttccgccccagtgacatcgtcctggccaaagttatctccctgggggacgcg
cagtccaactacctgctgagcacagcagagaacgagctgggcgtggtggtggcacgcagt
gaggcaggtaggggcaggacagggtctgggctgaaacagtgctcatccctgcctcagggg
cagctgatgaagctgcctccctctccgcatggaggaaagcaagtttgggaaggagcagcc
ctgacatattgtgccccaggggtgcagatggtgcccatcagctggtgcgagatgcagtgc
ccacggacgcacaccaaggagttccgtaaggtggcccgggtgcagccccagttcctgcag
acgtaa

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