Onychostruthus taczanowskii (white-rumped snowfinch): 121341831
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Entry
121341831 CDS
T07590
Symbol
TAF5
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121341831 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121341831 (TAF5)
03036 Chromosome and associated proteins [BR:
otc03036
]
121341831 (TAF5)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121341831 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
121341831 (TAF5)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121341831 (TAF5)
STAGA complex
121341831 (TAF5)
TFTC complex
121341831 (TAF5)
SAGA complex
121341831 (TAF5)
SLIK complex
121341831 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
121341831
NCBI-ProteinID:
XP_041271629
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MAALHEEPAEVAAVQPDPEAGTPPPPPAXAGAGGDAAPPKPAAPGPAASPAALDRQTLVA
VLQFLRRSNLRESEEILRREARLLGDDLGAGALSPASAGLLGGSGSDGDSGEALLGRGTG
AAAVAIGGNVATVATSSPGVAAVTAVPPGKVGGAVVVEDQPDVSAVLSAYNQQGDPTLYE
EYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYY
QDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQE
HLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGEN
EEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGP
ECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSL
IDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTF
TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRF
HPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLL
WDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTA
TGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcagaggtggcggcggtgcagccggaccccgaggcg
gggacgccgccgccgccgcccgcgngggcgggagccggtggggatgcggcacccccgaag
cccgcggcgccgggcccggccgcctcgccggcggcgttggaccggcagacgcttgtggcc
gtactgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcgtcgcgaa
gcccgcctgctcggtgatgacctgggtgccggcgccctcagccccgccagcgccgggctc
ctggggggctccggcagcgatggggactccggcgaggcgctgctcggccggggcaccggc
gctgccgccgtcgccataggaggcaacgtcgccactgtcgcgacttccagccccggggtg
gctgcagttaccgccgtgccgccggggaaagtcgggggcgcggtggttgtggaggaccag
ccggacgtgagcgcggtgctgtcggcctacaaccagcaaggggaccccacgctctacgag
gagtactacagcgggctgaaacacttcatcgagtgctccctggactgccaccgggcagag
ctgtctcagctcttttatcctctctttgtgcacatgtacttggaattggtctacaatcaa
catgagagtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgctattac
caggatgacctgcgtgtgttgtcgagcttaaccaagaaagaacacatgaaaggtaacgag
accatgctggatttccgaacgagcaagttcgtgctgcgcatttcccgtgactcttaccag
ctcctgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggag
catctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatg
gttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttcttcggc
ttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaat
gaggaaggaaagccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagtaaa
aaacaggaccctaatgctcctccccaaaacagaattcctctgccagaactgaaagactct
gacaagctggataaagtaatgaatatgaaggaagctgcgaggcgagtgcgtcttgggcca
gagtgcctgccctccatctgtttctacacattccttaatgcctaccagggtctgactgca
gtggatattacagatgactccagcatgattgtaggaggctttgctgactctactgtcaga
gtgtggtctgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctcagtctc
attgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgag
ttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgatagg
aactatctgttgtcctgttctgaggatggcactgtgagattgtggagtctccaaacattc
acgtgtttggtgggatataaaggacacaattatccagtttgggatacacagttctcacct
tatggttattactttgtgtctggtggacatgacagagtggctcgtctgtgggcaacagat
cactaccagccattacggatctttgctggccatcttgcagacgtgacgtgtacccgattt
catccaaactccaactatattgctacaggctcagcagacaggactataaggctctgggat
gttttgaatgggaattgtgtaagaatatttactggacataagggaccaattcattcactg
gcattttctcctaatggacgattcctggctactggagcaacagatggaagagttctgctg
tgggatattggacatggcttgatggttggcgaattgaaaggacacacagacactatctat
gcgctcagattcagtagggatggggagatcttagcatcaggttcaatggataacacagtt
cgtctgtgggatgctgtgaaggcatttgaagatttagaaactgatgactttactacagcc
actggacacataaacttgcctgaaaactcacaggacttgctactgggcacatacatgact
aaatcaaccccagttgttcatctccatttcacacgcaggaacctgctgctggctgcagga
gcctacagctcacagtag
DBGET
integrated database retrieval system
