Onychostruthus taczanowskii (white-rumped snowfinch): 121341893
Help
Entry
121341893 CDS
T07590
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otc03009
]
121341893 (PDCD11)
Ribosome biogenesis [BR:
otc03009
]
Eukaryotic type
90S particles
Other 90S particles
121341893 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Spt6_S1
Suf
OB_RRP5
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_14
TPR_19
ARM_TT21_5th
TPR_15
TPR_CcmH_CycH
ARM_TT21
Ras_bdg_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
121341893
NCBI-ProteinID:
XP_041271763
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MASMEENFPRGGIQKKPAEGKTPKPKSERDNLFDVQHEEKSLKRKRGQKDQEKQKRFKAD
KTVKAAVKDNVMNIGPLTIEALSEGMLLLGCIKEVSDYELAISLPNGLSGFVPVTQISDA
YSKLLTKQVAQGEVLEELNSLPDVFSPGTLVRCIVTSIEKRDDGRRSVKLSIDPKKVNKG
LNSTALAAGMLLSGSVSSVEDHGYLIDIGVIGTHAFLPHEKAKNYIKAVKKGPDLKIGQN
LNCLIVEVKNEGRVVCLSIDRSEVAASIATERQNWALSNLLPGLVVKARVQKVAPLGMKL
TFLSYFTGIVDFMHIDPEKSMSYSPDQVVKACVLSVHPTSRAVRLTLRSPFLHAGGAPRQ
LPGPRMGAVLEEATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAFKEGSKHK
CRIIDYSLMDEMCIVSLKNQIIEARFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRG
LVPSLHLSDVILKQPEKKYNVGDEVKCRVLECNPGGKKLILTLKKSLVQSKLPVLSNYED
AKPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPISCPDKVFYEGQVLKVMVLK
CEPQQERLLLSFRLSSKPGPEEKWKCTPKEKQEMKYQIGEIVDVKILKKKDNGLEVSILE
DEDNVVAWIPMLHLSDFVAASKLLWHCLQEGDVLPRVMYLSDKGEHIILSRKSAVISAVQ
EEQVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVV
GQTVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFGLLNQYFKELKEIRDLLKRGEPG
ICELVPGKRMHLVVQDVREDGSALFSGSSVTGLSVTATRYHLGAKNIAPGEKRKALVLHV
DALTSEVHVSLREELLKQRPKRRLRENSQHSAVVQHITEHFAIVSLLETGQLAAVPIACH
FNDTFRFDSEKLRVGQTISATLKTVKENNHGVLLAVQGPAKKNVFVRVRSESETALEETL
PAVKHSLSPGDVVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTSTLKAGQ
KVTARVIGGRDVNTHRCLPITHPHFTQSIPELSIRPSEQEGEFTAMLNLKEEKSLKKLGL
YDVGQTVTCFVKKYNVLKNWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFKSGQAISA
TVTGTDATETNLCLSLTGIQSLEQDTISVGMVTKVTSHVGLTITLPGGKTGKVSIFHLND
TYTEDPLGSFKVGKIVRCYILSNENGKIQLSLRQSRLNPKISSKVEDIEIKSIKDVKKGQ
LVRGYVKSVTPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLRVN
RKEKHTELSLLPEDTGMPSVLPESLGLPQYGAEEEKREADDEEKREEPKPKTKKRRGNHE
SGQEAKPKKRKICPTDENDSGIEVYYREEEEDQEEEAAKKKSTVRKPGEAPRLQVSMGFT
WDEDNAMDIPVLDQKEESSESEEEEDMQSKLKKRTKKEKDLEKQKKEKELCKAEAALMDP
SRQPQSADDFDRLVLGSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKL
NVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYASSEKCKQAEELYHTML
KRFRQEKSVWLKYASFLLKQGQAEATHRLLERALKALPTKEHVDVISRFAQLEFHSGDTE
HAKALFESTLSSYPKRTDVWSIYMDIMIKHGSQKEIRDIFERVIHLSLAPKKMKFFFKRY
LDYEKKFGTAESVLAVKRAALEYVESKSSLADT
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaactttcctcgaggaggcatccagaagaaacctgcagaggga
aaaacacccaagccaaagtcagagcgggacaatttgtttgatgttcaacatgaagaaaaa
tccctgaagagaaaaaggggccagaaagatcaagaaaagcagaaaaggttcaaggcagac
aaaactgttaaagctgctgttaaagacaatgttatgaatattggaccactcacaattgag
gcgctcagtgaggggatgctgctccttggctgtataaaagaggtcagtgattacgagctc
gccatcagtttgcccaacggcctctccgggtttgtgccggtcacgcagatcagcgatgcc
tacagcaaactgctgaccaagcaggtggcccaaggagaagtcctggaggagttgaattcg
ctcccagacgtgttttctccagggacactggtcaggtgcatcgtgaccagcattgagaaa
agagacgatggacgtcgcagtgtcaagttatcgattgaccccaagaaggtcaacaagggc
ctgaactctacagcactagcagcaggcatgctgctctctggctctgtgtcgagtgtggaa
gaccatggctacctcatagatattggtgtcattggaactcatgctttcctgcctcatgag
aaagccaaaaattacatcaaagcagtcaagaaagggcctgacttgaaaataggccagaac
ctgaactgcctcattgtggaagtgaagaacgagggcagggtggtctgtttgtccattgat
cgatcggaggtggctgcatccattgccacagagcgacagaactgggcactctccaattta
ttgccagggctggtggtgaaagctcgagtgcagaaggtggccccacttgggatgaaactg
acatttctgtcttacttcactggcattgtggatttcatgcacattgacccagagaaatcc
atgagctattctccagatcaagtggtgaaggcctgcgtgctgtctgtacaccccacgtcg
agggcggtgcggctcacgctgcgctcgcccttcctgcacgccgggggagccccgcgccag
ctccccggcccacgcatgggggcagtgctggaggaggccaccgtgaaagccttctacaaa
cagtttggggccatctttgagcttgacgatggcactcttgcgtttgcacggttgaaacat
ctttcaaaaaccagaaaatcctttaaacctggggcatttaaggaaggttccaaacataaa
tgtcggatcattgactacagcctgatggatgagatgtgtattgtatctctgaagaaccag
attattgaagcacggtttctgcagtaccaggatatccacacgggtgatgtggtgcagggc
aaagtgctctctctaaaacccattgggatgcaggtgaaagtggctgatgggattagagga
cttgtaccatccctccatctctctgatgtgatcctgaagcagcctgagaagaagtacaac
gtaggagatgaagtcaagtgtcgggtgctagagtgcaatcctggaggaaagaagctgatc
cttactctaaagaaaagtctcgttcagtcaaagcttccagtcctctcaaattatgaagat
gcaaaaccaggtctgattacacatggctttgtagtgtgtgcaagggagtttggctgcatt
gtgaagttctacaacgatgtcaaaggtctggtacccaagaatgagctgggctcagaaccc
atatcttgtccagataaagtcttctatgaaggccaggttcttaaagtaatggtcttaaaa
tgtgagcctcagcaggaaagactcttattgtccttcagattatcaagcaaacctggccct
gaggaaaaatggaaatgtactccaaaggagaagcaggaaatgaagtaccagataggagag
attgttgatgtgaaaatcttgaagaagaaagataatgggttagaagtttccatcttagaa
gatgaagacaatgtggtagcctggatccccatgctgcacctctctgactttgttgctgcc
tccaagctcctgtggcactgtcttcaagagggagacgtcctgcccagagttatgtatcta
agtgacaagggagagcacattatcttgagtagaaagtctgcagtgatttctgctgtacag
gaggagcaagttgtaagaagcttctcagaaatccagcctgggatgctgttgactggttat
gtgaggaatgtgatgccatttggagtatttgtggagttcccttttggtgtgacaggactg
gcacctaaagtgagcatgagtgacaagtttgtgacagacaccaaggaccacttcgtggtg
ggacagactgtgattgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctcctc
aatctgaaggtgtctgagtgcagctcaggagattctgctgcagagagctttggcctcctg
aatcaatatttcaaggagctgaaagaaatcagggacttgttgaaaagaggagagcctggc
atctgtgagttggtgcctgggaagaggatgcatctggtcgtgcaggatgtgagggaggat
ggctcagcactgttcagtggcagctctgtcacaggcttgtctgtaactgccacccgctac
catttgggagccaaaaatattgctcctggtgagaaaaggaaggcattggttcttcatgtg
gatgccctcacatctgaggtgcatgtttctcttcgggaagaactgttaaagcaaagaccc
aagcgacggctccgagagaactcgcagcactctgcggtggtgcagcacatcacagagcac
tttgccatcgtgtctctgctggagacaggccagctggcagctgtccccatcgcctgccac
ttcaacgacaccttccgcttcgactcggaaaaactgagggtgggacaaacaatctctgcc
accttaaaaaccgtgaaggagaacaaccatggagtcttgttagcagtacagggcccagcc
aagaagaatgtttttgtaagggtgcggagcgagtcagagacagccctggaggagacgctt
cctgctgtgaaacactcgctgtccccgggggatgttgttactggtaccgtcaaatccgtc
aagccgacccacgtcactgtagctattgatgacaagctgacgggttctatccatgcatcc
cggattctggatgaagtgcccataggctcttttccaacttctactctgaaagccggacag
aaagtgactgctcgagtcattggaggcagagatgtgaatactcacaggtgcctgccaatc
acccatccacacttcacacaatccattccagagctcagcattcgaccaagtgaacaagaa
ggggaattcacagcaatgctgaaccttaaagaagaaaagtccctcaaaaaacttggactc
tatgatgttggacagacagtcacctgttttgtaaagaagtataacgtgctcaaaaactgg
ctggaggtagaagttgccccggacattcgaggaagagttcctcacctgctgctgtctctg
aacaccaaggtcttaaaacatccagaaaagagctttaaaagtggccaggcaatatcagct
acagtgactggaacagatgccaccgaaacaaacctctgtttgtcactcacaggaattcag
tcactggagcaggacaccatctctgtaggcatggtaacaaaggtgacttcacacgttggc
ttgaccattacactgccaggtgggaagactggcaaagtcagcatctttcacctgaatgat
acttacacagaggatcctctggggagcttcaaagttggcaaaattgtcaggtgttacatc
ctctccaatgagaatggtaaaatccagttatctctcaggcagtcccggctaaatccaaag
ataagcagcaaagtggaggatattgaaataaaaagtattaaggatgttaaaaaaggccag
ctagtgagaggctatgtcaaatcagtcactccatcaggtgtattctttggattgtccact
tctcttctgggccgaatcctattccagaatgtttccccatactttgtacagaaacattca
ttatatgaaaagtacctgcctgaaggaaagctgctcactgccaaagtacttagggtaaat
agaaaagaaaagcatactgagctctctctcctgcctgaggacactgggatgccaagtgtc
ttgcctgaatccctaggcctaccacaatatggagcagaggaagagaaaagagaggcagat
gatgaggaaaaaagagaagagcctaagccaaagacaaaaaagagaagaggaaatcatgaa
agtggtcaggaggcaaagccaaagaagaggaagatctgcccaacagatgaaaatgacagt
ggaattgaggtatattaccgtgaggaggaagaggaccaggaggaagaggcagctaaaaag
aaatctacggtaaggaagcctggtgaagctcccaggctgcaagtttccatgggcttcacc
tgggatgaagacaatgcaatggatatacctgtgctggatcagaaggaagagagctcagag
agcgaggaggaggaggatatgcagtccaagctgaagaaacgaacaaagaaggagaaggat
ctggagaagcagaagaaggagaaggagctttgcaaagcagaggcggctctaatggacccg
agccggcagccccagtcagcagatgactttgaccgcctggtgctgggcagtcccaacagc
tccatcctctggctgcagtacatggctttccacctccaggctacagagattgagaaggcc
agagctgtggcagagagagcacttaaaacaatcagtttcagggaagaacaggagaagctg
aacgtctgggtagctctgctgaacttggagaacatgtatggtactgaggagacactgatg
aaggtttttgagagagcagttcaatacaatgagcctctgaaagtcttccagcatctgtgt
gacatctatgccagttctgagaagtgcaagcaagcagaagaattgtaccacacaatgctg
aagcgttttcgtcaggagaaatccgtgtggctgaaatacgcctctttcctcctgaagcaa
ggccaggctgaggctacacacaggcttctggagcgtgctctcaaggctctgcccaccaaa
gaacatgtggatgtcatttcaaggtttgcacagctggagttccattctggggacacagaa
catgccaaggccctctttgagagcaccctcagcagctatcccaagcggacagacgtttgg
tccatctacatggacatcatgatcaagcatggcagccagaaggaaatccgagacatcttt
gagagggtcatacacctgagcttggccccaaagaagatgaaattcttcttcaaacgctac
ctggattatgagaagaaatttggtacagcagaaagtgtcctggctgttaaaagagcagca
cttgagtatgtggagagcaagagttcccttgctgacacctaa
DBGET
integrated database retrieval system
