Onychostruthus taczanowskii (white-rumped snowfinch): 121343118
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Entry
121343118 CDS
T07590
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121343118 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121343118 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121343118 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otc04147
]
121343118 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
otc00536
]
121343118 (COL4A2)
Exosome [BR:
otc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121343118 (COL4A2)
Glycosaminoglycan binding proteins [BR:
otc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121343118 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121343118
NCBI-ProteinID:
XP_041273949
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQDTGLLLILMEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGQPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDPGTPGFSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGFMGFPGPPGTLGIQGPIGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELTGVPPDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGIMG
YPGERGLPGIPGFPGLSGERGIPGFDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGVSGLPGDRGDEGDRGLPGLPGFSDADADKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGLPGIRGPPGPVGAPGPLFGLKGREGTPGRFGTQGFPGPRGRKGPKGEE
GDCTKCLLGEELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGLPGYPGAKGFSGPAG
FPGRKGEKGDSLHITTKGTKGIQGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDAIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFRGPPGDQGQAGSPGSPGLPGLPGEPGQI
DCGQVIEDFPRGDATEPIWSGAGCVRPPKGSQGKPGVPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVF
GAPAGSRGDVGFPGFPGLKGAPGDQGVPGTRGADGSPGLPGPKGDPGPQGLPGLMGLPGT
PGAHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLRGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGARGD
KGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDAGERGTKGLFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPG
ISGHFGTPGSHGEIGDRGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGNPGTSGLTGQKGAPGWPGLPGQAGQPGFRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGVLGDKGEAGDPSRVEGSRGPPGQKGERGVPGVP
GPFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGVPAPPGSKGESGES
GRTGEIGPKGSRGDPGLSGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGNIGPQGSPGDMGPQGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGLEGQPGRPGSPGPAGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccagtgcacgtattttcctttgtcaggatacggggcttttg
ctgatcctgatggaagttgtgctgtcagccgtcaaagtggacgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggacagccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggggcagatggc
attcctggtcatccaggccagccaggaccaagggggaaaccaggccatgatggctgtaat
gggacagcaggtgaccctggtgacccgggaactcctggtttctctggtttccctggtagc
attggagtccaagggcccaagggccagaagggggagccgtacatagtagcgccggagatc
atcagccgacacaggggagatcctggggattcagggttcatgggttttccaggacctcca
ggtacgctgggtattcaaggacccattggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccacctgggcttcctacaagagaactg
acaggtgtcccacctgacaagcacaagggtgaaagaggagaccctggaccaagaggagaa
gctggaattccaggtgttcttctctttcctctcgaaaaaggtgaagaagggataatggga
tacccaggagaaaggggactgcctggcatccctggttttccaggactcagtggagaaaga
ggtattccaggatttgatggtccacccggtggccatggtcccagaggaagcaagggggag
cctggcgagatgggtcctccagggccagattcttattttccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggtttcccaggtgtttctggactcccaggagaccgaggagat
gagggagatcgtggattgcctggtcttcctggattttctgatgcggatgcggataagcca
ggcttacccggagaaatgggaccaaaaggtgaaaagggtgaaataggatctcctgcttat
tttgcgggaccgcctgggcttccgggtaaggatggcttacctggaattcgtggtccacct
ggtcctgttggagcacctggtcctctctttggattaaaaggacgagagggaacaccaggt
agatttggtacacaaggtttccctgggccaagaggacgaaaaggacctaaaggtgaagaa
ggggattgcactaaatgccttttgggtgaggaactcagaaggggctctactggcccccgt
ggtcctcctggctttccaggaacccctggccagcctggaaggaaaggagaacctggtgat
caaggaccacatggtcttcctggctaccctggagcaaaaggattttcgggtccagctgga
tttcctggacggaaaggagaaaaaggagactctttacacataactactaaaggcaccaaa
ggaatccaaggagatcctgggctgcctggaatcagaggtgaagatggtttcccaggcaga
gatggattagacggtttaccaggacagcctggccttccaggtgatgctatcagaggtttc
cctggtgatcctggttatccaggtgaattaggcccaaagggctttccaggagaagcaggt
ctgccaggtgaaggatttcctggtccaaaaggcttccggggtcctccaggtgaccaagga
caagctggaagcccaggatctccaggtctgcctggtctgccaggagagcctggccaaata
gactgtgggcaggtcattgaagactttcctagaggtgatgcaactgaaccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaagccaggagtgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatgggtttcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggttttact
ggacccaggggagacagaggcccaaatgggctgcctggactgcagggacacccaggcctt
acagggaaatctggagctccaggagcaccaggaccgaagggccttcctggtgacgtgttt
ggagcaccagcagggtcccgaggggatgtcggcttccctggcttcccagggctgaaaggt
gcaccaggagatcaaggagtaccaggaactagaggagcggatggtagcccaggtttgcca
ggacccaaaggagatccagggccacaaggtctccctggtttgatgggattaccaggaaca
ccaggagcacatggattcccaggtccaccaggaaaccgtgggccagatggtggccctggc
tcccaaggacctctcggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccccgtcggcctgaagggtctgtctggtgacaaaggtgacatgggtcacacgggactg
ccaggtatacgtggtgtgactggtccacctggcataagtggaatggatggctttccagga
gataaaggcttgagaggttcacccggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaatcaagggagaatttggcccacttggggcacggggagat
aaaggctcacagggtgcacgtggcttcaaaggtgaccgtggggatcaaggtcccccagga
gaacctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgct
ggagaaaggggcacaaagggattatttggcttaaaaggtagcaagggaatgccaggcctt
cctggaaagacaggaaccccagggtcccctgggcatcccagctacgtggctggtgtgaaa
ggagacatcggcgcgaaagggctgacaggtgtgaaagggtatcctggtcctgctggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcattccagga
atttcaggccattttggtactcctggctcacatggagaaataggtgatcggggagatact
ataaacttaccaggaatgccaggccttaaaggggaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggcctcaagggcacgcagggtgtccctggctctgtgggacaggaaggtttgccaggactg
gttggccccccagggcagcaaggaaaccctgggacttctggacttacaggtcaaaaggga
gctcctggctggcctggcttaccaggacaagcaggccagcctggcttcagaggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtgtactgggtgacaaaggagaagcaggagacccaagcaga
gtggaaggcagccgaggacctccaggccagaagggagagagaggtgttccaggagtccca
ggaccctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagtgccaggctatccagga
ccacaggggcagcctggagtacctgctccaccaggaagcaaaggagaaagtggagaatca
ggtaggactggagaaattggcccaaaaggaagtagaggtgatcctggattatcaggaaga
cctggcctgcctggattccctggaccaaaaggtcctaggggcgaacaaggtgtcattggc
tttatgggcacagtaggatttccaggtgatctgggacccatcggacccaagggagataga
ggagtaacaggcttccagggacctccaggctctcctgggctgccccctcttcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatataggacctcagggaagccca
ggagatatgggacctcagggcccaccaggagatccaggtttcagaggctcaccgggagag
ccaggactccagggcaggggcggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccggtgggacttgaaggtcagccaggccgccccggcagcccg
gggccagcaggcatgccgggtcgcagcgtcagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtactttgaagggcaagagaaagcacacaaccaggatctagggctggctggctca
tgtttgtctcgctttagcaccatgccattcctctactgtaaccctggggatatttgttac
tatgcaagtcgaaatgataaatcctactggctctcaactacagcacctcttccaatgatg
cccgtggcagaagaagacattaagccatacatcagtcgctgctcggtctgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattccccactgccctgaaggctgg
cgcagtttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcctggaagatttcagggcgactcctttcatc
gagtgcaacggcgcacgcggaacctgtcactactttgcaaacaaatacagcttctggctc
accaccatcgaccagcccttccagagcaagccctcgggagacacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacttgtaa
DBGET
integrated database retrieval system
