Onychostruthus taczanowskii (white-rumped snowfinch): 121343162
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Entry
121343162 CDS
T07590
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121343162 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121343162 (TGFBRAP1)
Membrane trafficking [BR:
otc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121343162 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
121343162
NCBI-ProteinID:
XP_041274038
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKVSTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMINLEPVPTGARIKGAVT
FTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRTHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYDYIVDFLTFCSDQEL
VWKYSEWILQKNEEVGVQIFTKRPLEEQEKNNFNPDDIISCLNKYPKARVKYLEHLVLER
KIQKEKYHTHLAVLYLEAILQLKSETTDNCTETTELLLKLRSLLQKSDLYRIRFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCVWNSENRDLQYRRRLFHMLLS
VYLTPGTSDCALVMAAVDLLNNHAAEFDAGLVLQVVPDSWSVQLLSPFLAGAVRQSIHTK
RMTQVALGLAQAENLIYKHEKVKQKGAPILLSDKKVCQVCQNPFCEPVFVRYPNGSVAHT
HCAANRHPNSNVTHHSPSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaaagctttcaagctcgtttctgctgttgagcgggagatgttaatgggagac
aaaaattatatcaacatcgagtgcattgagtgttgtgggaagaacctctatattggaacc
aatgactgctttatctatcactttctgctggatgaaaaggtatccacagctggaaaaata
acttttgctgccaccaagcaactacacaaatacctgggtttgaagaagcctgtgagcgag
ttgaaagcagcctctgccctcacgagactgcttgtgctttgtgacaacacgataacacta
gtgaacatgatcaacttggaacctgtccccactggtgctaggatcaaaggagctgtgaca
ttcacactgaatgaaaaccctgtgagtggggatcctttctgcgttgaagtttgcattatc
tcggtcaagcgtcgcaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttactacttatgc
cttgcccttactacacagtatataattttgaattacaatactggcgtctcccaggaccta
tttccttattgcagtgatgagaaacggccaattgtgaaaagaataggcagacaagagttt
ctgttggctggccctggaggcctaggcatgtttgctactgtagatgggatttcacagcgt
gccccagtgcactggtcagagaacgtgattggggcagctttgtgctttccttacgtggtt
gctcttgatgatgagttcattacggtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aacaagggtgtatatatcttggtgccactacctttggaaaaacagattcaggatcttcta
gctagccacagagtggaagaagcccttgttctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctgtaccccttcctgttgcctacttcctcttcatttatccggactcat
cctcctctgcacgagtacgccgacctgaaccagctgacccaaggggaccaggagaagatg
acaaaatgcaaacgattcctcatgagttacttgaatgaagtccgcagcactgaggttgca
aacggatacaaggaggatattgacactgctttactcaaactgtatgcagaggcaaatcat
gaaagcctgctggatctcctagtttcagagaacttctgtcttttaacagatagtgctgcc
tggctggaaaaacacaaaaagtattttgctcttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagttgatggagacattcaagattctaca
cgttcagatctctatgactacatagtagacttccttacattctgctcagaccaagagctg
gtgtggaagtattctgaatggattttacaaaaaaatgaagaggttggtgtacagattttc
accaaaaggcctttggaagaacaggagaaaaacaactttaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgtcaaatatctagaacatctagtactggaaaga
aaaatacagaaagaaaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgagaccacagataattgtacagaaacaactgaactgctgttgaaactt
cgcagtctgcttcagaaatctgatctttatagaattcgctttattttagacaaaatccag
ggcacagaccttcacatggagagtgcaattttatatgggaaactagaagaacacgagaag
gctttgcatatcctcgtccatgagttgaaggacttccatgctgctgaagagtactgtgtg
tggaactctgagaacagagacttgcagtacaggcggaggcttttccatatgctgctgtca
gtgtatttaactccaggcacttcggactgtgcgctcgtcatggctgctgtggatctcctg
aacaaccacgctgcggaatttgatgcaggtctggttctgcaggtggtgcccgacagctgg
tcagtgcagctcctctcccctttcctggctggagcagtgagacaaagcattcacacaaaa
agaatgactcaggtggcacttgggttagcacaagctgaaaacttaatctacaagcatgag
aaggttaaacaaaaaggagccccgattcttctttcagacaaaaaggtgtgtcaggtgtgc
caaaatcctttctgcgagcctgtgtttgtaagataccccaatgggagtgtggcccacacg
cactgtgctgcaaacaggcatcccaattccaatgtgactcatcattctcccagctccagc
aatcagacttga
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