Onychostruthus taczanowskii (white-rumped snowfinch): 121344243
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Entry
121344243 CDS
T07590
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04512
ECM-receptor interaction
otc04514
Cell adhesion molecule (CAM) interaction
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121344243 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
121344243 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121344243 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121344243 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otc04090
]
121344243 (SDC1)
00535 Proteoglycans [BR:
otc00535
]
121344243 (SDC1)
Membrane trafficking [BR:
otc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121344243 (SDC1)
CD molecules [BR:
otc04090
]
Proteins
121344243 (SDC1)
Proteoglycans [BR:
otc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
121344243 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
121344243
NCBI-ProteinID:
XP_041275958
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MALLLLLLLPRLREPCRGNPAPQPREVLCSPLQVCAGSLGGVEPRVRSEALIKSRRCNQW
SQRERLSDQPLHVCSKQTTNLNLPPEDLDSSGDEDDTFSGSGAGPLTDPSHAWRISGEST
NSSTVASPVDFSEQPFHGIESRTEKEVISPSATSNPVTEEPVVAVKDEVSILGSPDGKPT
SHAVTTTVRSPTAHFPSVVHVTPSEASAVVHELEPKIPSSDVPDTKDVPEPHSTVHGEGD
VAATPAATAPRDVVPTHEEVSEDGSGDPGDFILTKDEEFLPTQNSEVLADSERNAKAAGA
SGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHK
QEEFYA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctcctgctcctgctcctgccccgcctgcgagagccttgccgcggaaacccg
gctccgcagccccgtgaagtgctgtgctcgccgcttcaggtctgtgctggcagcctgggc
ggcgtcgagccccgtgtgcggtcggaggccctcattaagtcaaggcgatgtaatcagtgg
agccaaagagagcgattatctgaccagcccctgcacgtctgctccaagcaaactacaaat
ctaaaccttccccctgaagaccttgattcatctggtgatgaggacgacacgttctcaggt
tcaggtgcaggtcccctgactgacccatctcacgcctggagaatctcaggagaatcaact
aattcctcaacagtggcatcaccagtggatttcagtgaacagccatttcatgggattgag
agcagaactgaaaaggaagtaatatccccttctgcaaccagtaatccagtgacagaggag
ccagttgtagcggtgaaggatgaagtatccatcctgggctcacctgatgggaaaccaaca
agccatgcagtcacaacaacagtgagaagtcccactgctcactttccttccgtggttcat
gtgactccttcagaagcctctgctgtggtccatgagcttgaacctaaaatccccagctct
gatgtgccagacaccaaggacgtgcccgagccccactctactgtccatggcgagggagac
gtcgctgccacccccgcggccacagctccaagggatgttgttcctacacatgaggaggtt
tctgaagatggctctggagacccgggagacttcatcttgactaaagacgaggaattcctc
ccaacccagaactcagaagtactggctgactctgagaggaatgccaaagcagcaggagcc
tcaggaattatggacagaaaagaagttcttggaggtgtaattgctggaggacttgtaggc
ttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagatgaa
ggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaaaccacacaaa
caagaggaattctatgcataa
DBGET
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