Onychostruthus taczanowskii (white-rumped snowfinch): 121344326
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Entry
121344326 CDS
T07590
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121344326 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121344326 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otc00536
]
121344326 (TNR)
Glycosaminoglycan binding proteins [BR:
otc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121344326 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_Tor_3rd
EGF_2
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
121344326
NCBI-ProteinID:
XP_041276122
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MGTDGENPILRSVVISFNLLLLGAVLKPFECRLEMTTEPAERTAVDEAAGLANCSPPIKE
QPMVFHHIYNINIPLDSCCSSVFKSSAEEVSSEDDRLAEYTEQTSDSESQVTFTHRINMP
KQACKCSTSLPSLQELLSRIEMLEREVSILRDQCTSNCCQDNAATGQLDYIPQCSGHGNF
SLESCSCVCMEGWAGSNCSEPRCPGGCSSRGVCLEGQCICDNDYGGEDCSQLRCPAGCGS
RGLCVDGECVCEEGFAGEDCSQLRCPRDCSGRGRCENGTCVCQEGFAGRDCAAPRCPGAC
SGRGVCRDGLCVCEGGYDGQDCSAVSPPENMRVTGISDSSIELAWDSPGAATEYVVSYQP
AVPGGTQLQQRVPGDWSSITITDLEPGVAYNVSIYAVISDAFSIPVTSKVMTNLATPQGL
KFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDAILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPAFAQFTTEIDAPKNLR
VGSRSPASLELAWDNSEAEAQSYRVVYSTLAGEHYHELLVPRHAGPTTRATLADLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKATGPIDHYRITFT
PASGMASEVTVSRDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPISQLH
FSQLTSSSVNVTWSDPSPPADRLILTYSPRDEEEEAQQVTLDGTRRHTSLTGLQPSTEYL
VSLVAVHGTISSEPVVGSITTGIDAPKDLRVGNVTQESMMVYWSAPIAAFDHYRISYRAA
EGRTDSMTISRDATEYTLQDLQPATKYEIEVKSVRGREESELASITAYTAMDVPLGVTAT
NITPTEALLQWNPPLSEVESYVLILTRRAVAGETILVDGDSQEYQLTNLLPSTTYTVSMY
ATSGPLTSQTVSTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGEIENYVMTYRSTDGSR
KELIVDAEDTWIRLEGLSETTEYTVHLQAAQNAMRSGLISTTFTTGGRVFANPQDCAQHL
MNGDTLSGVYTISINGDLSQRVPVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFG
NLEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYNG
TSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGIN
WYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggggactgatggcgaaaacccgatcctgaggagtgtggtcatcagcttcaacttgctc
ctgctgggcgctgtcctcaagccttttgagtgccgtctggagatgacgacagagccggcc
gagaggacagcggtggatgaggcagctggcctcgccaactgcagcccacctatcaaagag
cagcccatggtcttccaccacatctacaacatcaacatcccgctggacagctgctgctca
tccgtgttcaagtcttcggccgaggaggtgagttcagaagacgaccggctggcagagtac
acggagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacatgccc
aagcaggcctgcaagtgctccacctccctcccatccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatcctccgggaccaatgcacctccaattgctgccaa
gacaatgcagccacagggcagctggattacatcccgcagtgcagcggccacgggaatttc
agcctggagtcgtgcagctgcgtgtgcatggagggctgggcgggcagcaactgctcggag
ccgcgctgcccggggggctgctccagccgcggcgtgtgcctggagggccagtgcatctgc
gacaacgactacgggggcgaggactgctcccagctgcgctgccccgccggctgcggctcc
cgcgggctctgcgtggacggcgagtgcgtgtgcgaggagggcttcgccggggaggactgc
tcccagctgcgctgcccccgcgactgctcgggccggggccgctgcgagaacggcacctgc
gtgtgccaggagggcttcgccggccgcgactgcgccgcgccgcgctgccccggcgcctgc
agcggccgcggcgtctgccgagacgggctctgcgtctgcgagggaggctacgacgggcag
gactgctcggcagtgtctcctcctgagaacatgcgggtgacagggatcagcgacagctcc
atcgagctggcgtgggacagccccggggcagccaccgagtacgtggtgtcctaccagccc
gccgtgccagggggcacccagctccagcagagggtgcctggggactggagcagcatcacc
atcacggatctggagccgggtgttgcctacaatgtcagcatctatgcggtcatcagtgac
gccttcagcatccccgttacctccaaggtgatgactaacctcgccacaccgcaggggctg
aagttcaagaccatcacagagacaacggcagaggtgcagtgggagcccttctccttcccc
ttcgacggctgggagatcagcttcatccccaagaacaacgagggtggtgtgatcgcccag
ctccccagcaccgtcaccaccttcaaccagacggggctgaagccaggggaggagtacact
gtcaccgtggtggccctgaaggaacaagccagaagccctcccacctccgacagcgtctca
accctcattgacggcccgacgcagatcctggtgcgggacgtctccgacacggtggccttc
gtggagtggaccccgccgcgcgccaaggtggacgccatcctgctgaagtacgggctggcg
gacggggagggcggcaggaccaccttccgcctgcagccccccctcagccagtactccctg
caggccctgcgccccggcgcccgctaccacctcgccgtcagcgccctccggggtgccaac
gagagccggccagcctttgcccagttcaccacagagatcgacgctcccaagaacctgcgg
gtgggctcgcggagccccgccagcctcgagcttgcctgggacaacagcgaggccgaggca
cagagctacagggtggtctacagcaccctggccggggagcactaccacgagctcctggtg
ccgcgccacgccggtcccaccacccgggccaccctcgcagatctggtgccgggaacagag
tatggcatcgggatttcagccgtgatggacagccagcagagtgtgccagcgaccatgaat
gccaggactgagcttgacagcccccgggacctcctggtgacagcctccactgagacatcc
atctcactggcttggaccaaagccacaggtcccatcgaccactaccgcatcaccttcacc
cctgcctcaggaatggcctctgaagtgacagtgtccagggatgagtctcagctcaccctc
tcggagctggagcccgggacagagtacaccatctctatcattgctgagaggggacggcag
cagagcctggaggccactgtggatgccttcacaggtgttcggcccatctcacagctgcac
ttctcccagctgacatcctccagtgtgaacgtcacatggagtgacccatccccaccagca
gaccgcctcatcctcacctacagcccccgggatgaggaggaggaggcacagcaggtcaca
ctggatggcacccgcaggcacaccagcctgacgggcttgcagccctccaccgagtacctg
gtgtcactggtggccgtgcacggcaccatcagctctgagcccgtcgtgggctccatcaca
acagggattgatgcaccaaaggacctcagggtgggcaatgtcacccaggagtccatgatg
gtctactggagtgctcccatcgctgcctttgaccactacaggatatcctaccgtgctgcc
gaaggaaggacggacagcatgaccatctccagggatgccaccgagtacaccctccaggac
ctgcagcctgccaccaagtatgagatcgaggtgaagagcgtgcggggccgggaggagagt
gagctggcctccatcactgcttacacagccatggatgtccccctgggggtcacggccacc
aacatcactcccaccgaggcgctgctgcagtggaacccgccgctgtcggaggtggaaagc
tacgtcctcatccttacccgccgtgcagttgcaggagaaacaattctcgtggatggagac
agccaggagtaccagctgaccaacctgctgcccagtaccacctacacagtttctatgtat
gccaccagcgggcctctcaccagccagaccgtcagcaccaacttcaccactcttttggat
cctccaaccaatctgacagccagcgaagtcacccgacggagtgccctgctgtcctgggtt
cctcccgtgggagagatcgagaactatgtcatgacctacaggtccaccgatggcagccgg
aaggagctgattgtggatgctgaggacacgtggatccgtctggaggggctttctgagacc
acggagtacacagtgcacctgcaagctgcccagaacgccatgcggagcggcctcatctca
accaccttcaccacaggaggacgtgtgtttgctaaccctcaggactgtgcccagcacctg
atgaacggagacacgctgagcggggtctacaccatctccatcaacggggacctcagccag
cgggtgcccgtgtactgcgacatgaccactgatggaggtggctggattgtcttccagcgg
cggcagaacgggctgaccgatttcttccggaaatgggcagattaccgggttggctttgga
aacttggaggatgagttttggctgggcttggacaacatccacaagatcacatcccaaggg
cgctacgagctgcgaatagacatgagggatggtcaggaggcagcgtacgcctactatgac
aagttctccattggcgactcccggagcctctacaaactgcggattggggactacaatggc
acttcaggagactccctcacctatcaccagggacgccccttctccaccaaggacagggac
aacgacgttgctgtgaccaactgtgccatgtcctacaaaggggcctggtggtacaagaac
tgccaccgcaccaacctcaacggcaagtacggcgagtcccggcacagtcaggggattaac
tggtaccattggaaaggccacgagttctccatcccctttgtggaaatgaagatgcgacct
tacaaccaccgtaacatctctgggaggaagagacggtccctacagctctga
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