Onychostruthus taczanowskii (white-rumped snowfinch): 121344416
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Entry
121344416 CDS
T07590
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03082
ATP-dependent chromatin remodeling
otc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121344416 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121344416 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otc01009
]
121344416 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121344416 (SMARCB1)
03036 Chromosome and associated proteins [BR:
otc03036
]
121344416 (SMARCB1)
Protein phosphatases and associated proteins [BR:
otc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121344416 (SMARCB1)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121344416 (SMARCB1)
SWI/SNF complex
121344416 (SMARCB1)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121344416 (SMARCB1)
PBAF complex
121344416 (SMARCB1)
SWI/SNF complex
121344416 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
121344416
NCBI-ProteinID:
XP_041276284
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRSHSPRRYHGYTTLATSVT
LLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCST
TINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMN
EKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIH
VGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFS
ENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaactacttgcgcatgtttcggggctccctgtacaagaggtacccctcgctc
tggaggcgcctggccacggtggaagaaaggaagaagattgtggcctcttcacatgaaaat
cagcggtctcacagtccccgaagatatcatggctacacaacgttagccaccagtgtgacg
ctgctgaaggcctctgaagtggaagagatcttggatggaaatgatgagaagtacaaggca
gtgtctatcagcacagaacctcctacctacctcagagaacagaaagcaaagaggaacaac
cagtgggtgccaaccctgcccaacagctctcatcacctggacgccgtgccgtgctcaaca
accatcaacaggaaccgcatgggcagggacaagaagagaacattccctctgtgctttgat
gaccatgacccagcagtgatccatgagaatgcatcccagccagaggttctggttccaatc
aggcttgatatggaaattgatgggcagaaactccgagatgcatttacgtggaacatgaat
gaaaaactgatgaccccagaaatgttctccgagattctttgtgatgacctggatttgaat
cctctgacctttgtccctgccattgcatctgccatccgacagcagatcgagtcgtacccg
actgacagcatcctagaggatcagtcagaccaacgagttattattaagctgaacatccat
gtaggaaacatctcccttgtagaccagtttgagtgggacatgtcagagaaggagaactcc
ccagagaagtttgccttgaagctgtgctcagagcttggcctgggcggggagtttgtcacg
actattgcctacagcatccggggacagctgagctggcaccagaagacctatgccttcagc
gagaaccctttgcccaccgtggagatcgcaatccgcaacacgggggacgctgaccagtgg
tgccctctcctggaaaccctcacagacgctgagatggagaagaagatcagagaccaggac
aggaacacaaggcgcatgagacgtttggccaatactgctccagcctggtaa
DBGET
integrated database retrieval system
