Onychostruthus taczanowskii (white-rumped snowfinch): 121344424
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Entry
121344424 CDS
T07590
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03030
DNA replication
otc03410
Base excision repair
otc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121344424 (POLE)
03410 Base excision repair
121344424 (POLE)
03420 Nucleotide excision repair
121344424 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otc03032
]
121344424 (POLE)
03400 DNA repair and recombination proteins [BR:
otc03400
]
121344424 (POLE)
Enzymes [BR:
otc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121344424 (POLE)
DNA replication proteins [BR:
otc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
121344424 (POLE)
DNA repair and recombination proteins [BR:
otc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
121344424 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
121344424
NCBI-ProteinID:
XP_041276302
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MGQRDGAEPEPARRGRRPGGPREPADGAGSGRDDAPALSALKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRQSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKVAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLLKVRKEIS
PAVRKNREQDQASDVYTTMLSSALSGASLSTDEEGVSKKIANQMDNIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGNTYAPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIRRWFEHV
QETKPTVIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
QEEQAKYEKKRLADYCRKAYKKIHVTRVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEG
KKQILANPPVEGTPSSQVRDIEDFGAVKIPLPLVPIANKRKRIPAAEESQELSQDLELSQ
SWREILGPPPSLGTTKEERLVWLRFHQKKWELQARQRQERRKRRRLEDGGVVAGGGVVRD
ALSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYL
YHSSQGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSVERTALLEKVGKELLPPD
KHTFEVRAETDPKAIYRGVQRLLLGYKDERRGPTLVAVQSNWGLKQLASGIPIIEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLHRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRHIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVDSRIHYGEKDTSKTLEEESEEEEEVVREEEEEKGEPDVEE
LLENNWNIAQFLPQAGSCQSYFLMIISAYIVAVYHSMKEELRRNTPGSTPIKRRSTSQVS
QEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVLPGSY
LPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSYVLP
EVICRNCNFCRDLDLCKDTTLSQDRSVLPGWLCPSCHVQYDIDVIEMALVEALQKKLMAF
VLQDLVCKKCHGVKETHMPVYCSCAGDFTLTISSQVFMDHVRVFQNIAQHYGMAYLLETI
EWLLHTNLQLQQ
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcgggacggcgccgagcccgagccagcgcggcgggggcggcggccgggcggg
ccccgggagccggcggacggcgccgggtccgggcgtgacgatgcccccgcgctgtctgca
ctcaagcgcctggagcgggcacagcgcacggaccggttggacgcgctgttcggcttcgag
cgacccgcagagcccggtgagcggacgggctggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcagtcagtgagcgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctacaagccctacttctacattgccacccagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaaggttgcaaagctg
gaaactgtccccaaagaggacttggacctgccaaaccacttggtaggcctgaagaggaac
tacatcaagctgtccttcaacacggtggaggacttgttgaaggtgcggaaggagatctct
cctgctgtgaggaaaaacagggagcaagaccaggcgagtgatgtctacacgaccatgctg
tcgagtgctctgagtggggccagtctaagcacagatgaggaaggagtgtcaaaaaaaatt
gccaaccagatggacaacattgtggatatgcgggagtatgatgtcccttaccatgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaacgtgcgataccggggcaac
acctacgcacctgaaatcacccgtcgagatgaccttgtggagaggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatggacagggctacctgatcacaaacagggag
attgtctcagagaacattgaagactttgagtttactcccaagccggagtatgagggtcca
ttttgtgtctttaacgaaccagatgaggctcatttaatccggagatggtttgaacatgtc
caggagaccaaacccaccgtcattgtcacatacaacggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaagaaattgggtttcagaag
gacagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaggcagcagctaaagcaaaa
ctgggttacgatccggtggagctggaccctgaggagatgtgccggatggccacagaggag
cctcagaccttggccacctactcagtgtctgatgccgttgctacttactacatgtatatg
aagtacgtgcatcccttcattttcgccttgtgtactatcattcccatggagcctgatgag
gtgttaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctaccat
gccaacatcatcttccccaacaagcaggagcaggaattcaacaaacttacagaagatgga
catgtgctggactcggagacctatgtgggaggccacgtggaagcactggaatctggagtc
ttccgcagtgacattccctgccgcttcaaaatgaatcctgctgcctttgacttcctcgtg
cagcatgtggagaagaccctgcagcatgccatcgaggaagaggagggtcttcccttggat
caggtcaccaacttccaggaggtttgtgatgaaatcaaggccaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctccgccatggtggatgaggccacatgt
gctgcctgtgacttcaacaagccaggcgccaactgtcagcgccggatgacgtggcagtgg
agaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcagagaagttccctcccttgttccctgatggaccaccccgtgccttccatgagctctcc
caggaagaacaagccaagtatgagaaaaagcgcctagcagattattgccgcaaggcatac
aagaagatccatgtcaccagggtggaggagcgagtcaccaccatctgccaacgagaaaac
tctttctatgtggacacggtgcgagcattccgggaccgccgatatgagttcaaggggctg
cacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtg
aaacgctgcaagaacatggagatcctctatgactcccttcagctggcccacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtactccatggaaatg
gctggcattgtctgtttcacaggggcaaatatcatcacccaggccagagagctgatcgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaacagc
ttcccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaagtaaccatctct
tacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaacgaccagtaccag
gaactgcaggatccagcctcgctcacctacgtcacgcgctcagagaacagcatctttttt
gaagtggatggtccatacctagccatgatacttccagcctccaaagaggagggcaagaag
ctgaagaaaaggtatgctgtgttcaatgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcgtctgtgtttgaa
gcctttctgaaaggcagcaccctggaggaggtctacgcttctgtggccaaggtggccgat
tactggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaaccggtccatgtcacgtaagctggaggactacggggagcagaagtcc
acctccatcagcactgccaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttccaagaaaccagaaggatctcccgtcactgag
agggccatcccccttgccatcttccaagccgagcccagtgtgcgcaaacactacctccgg
aaatggctgaagagcccctcgctgcaggacttcaacatccgtgcgatcctggactgggac
tactacatcgagagactgggcagcaccatccagaaaatcatcaccattcctgcagccctg
cagcaggtaaagaacccagtgccacgggtccgacacccagactggcttcacaagaaactc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctttttgtttcagaaggc
aagaaacagattcttgccaacccacctgtggaggggacacccagctcacaggtccgtgac
atagaagactttggggctgtcaagatccctctgccactggttccaattgcaaataagcgg
aagcgcatccctgcagcagaggaaagccaagagctgtcccaggacctggagctgtcccag
tcctggcgggagattctgggcccacctccatcccttggcaccaccaaggaggagcgtctg
gtctggctgcgcttccatcagaagaagtgggagctgcaggctcggcagcggcaggagcgg
aggaagaggcggcggctggaggatggtggggtggtggcaggtggaggagtggtccgtgat
gccctctccaaagggctgagcagttacctgcgccgaacagcgcgcagcatcctggacttg
ccctggcaggtcgtgcagatcgctgagaccagccagcctggactgttccggctgtgggca
gtgatagggagcgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggaacagcctacaggaaggtaaacaggatcctgccc
cgctcaaacttagtttacaacttgtacgaatactctgttcctgaagacatgtaccaagag
cacatcaatgaaattaatgcagacctctctgctccggacatcgagggagtgtatgagaca
caggtgccactgctcttccgtgccctgatccacctgggctgtgtgtgcatggtcagcagg
cagcttgtccggcacctggcagggcgagaggctgaaaccttcaacatcgagcacctggag
atgcgctcactggctcagttcacttacctggagcctggaagcattcgccacatctacctg
taccacagctcccagggcagcaaggcactcctgggcctcttcatcccctcacagcgcaag
gctgccgtctttgtgctggacaaggtacgcagcaaccagatgccaaacctcaccaccttg
ttctcggtggagcgcacggctctgctggaaaaggtgggcaaggagctgttgcccccagac
aaacacaccttcgaggtgcgtgctgagaccgaccccaaggccatctacagaggtgtccag
cggctgctcttgggctacaaggatgagcgccggggccccacgttggtggctgtgcagtcc
aactggggcctgaaacagctggcgagtgggatccccatcattgaggagttccccttggtc
cccatccggctggtagatgacatcagctactcggtcctggactggcagcgccatgctgcc
cgccgcatgattcgccactacctcaacctggacacctgcctttcccaggcttttgagatg
agcaggtactaccacatccccattggaaacctccctgatgacatctccaccttcggctct
gacctgttcttctcacgccaccttcatcgtcacaaccacctgttgtggctgtcccccaca
gcccgccccgacctgggggggaaggaggctgatgacaaccgcctggtcatggagtttgat
gagagagcctcagtggagatcaacaaccctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaacaccgtgttgcagtcccaccacgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccctggaggacatg
gtcacagggaaccaagctgccaacatcccagccagctatgatgagactgctctctgctcc
aacactttcaggattttgaagagcatggtggtgagctgggtgaaggagattacacagtac
cacaacgtctatgcagacaaccaggtcattcacttttaccgctggctccgctctccttcc
tccctgctttatgacccagcactgcaccgcacgctccacaacatgatgaagaagcttttc
ctgcagctggtggctgagttcaagcgcctgggctcctctgtggtctacgccaacttcaac
cgcatcatcctgtgcaccaagaagcggcacattgaggatgccatcagctacatggagtac
attatcaacagcatccactccaaggagatcttccactctctgaccatctcgttctcccgg
tgctgggagttcctgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcatccactatggggagaaggacaccagcaagacgttggaggaggagagtgag
gaggaggaggaggtggtgagggaagaagaggaggagaaaggggagccagatgtggaggag
ctgctggagaacaactggaacattgcgcagttcctgccccaggccggctcctgccagagc
tacttcttgatgatcatatcagcctacatcgtggctgtgtaccacagcatgaaggaggaa
ctgcggcgtaacacccctgggagcacccccatcaagaggaggagcaccagccaggtgtcc
caggaggctctgggggagctgagggccatgcctggcatgatcaccttctcacaagattac
gtggccaatgagctcacccaaagcttcttcaccatcacccagaagatccagaagaagatg
gctggttcccagaatgccacagagccctcagacatgttcccagtcctgcctggctcctac
ctgccactcaacaacccagccctggagttcatcaaatacgtctgcaaggtcctctccctg
gatgccaacataaccaaccaggtgaacaaactacgccgggacctgctgcgcctcatcgag
gtgggcgagttctcagaagcagcccagtttcgggacccttgccgctcctatgtgcttcct
gaagtcatctgcaggaactgcaacttctgcagggacttggacctgtgcaaggacactacc
ctttcccaggacaggtcagtactgcccggctggctctgccccagctgccatgtgcagtat
gatattgatgtcattgagatggcactggtggaagctctgcagaagaagctgatggccttt
gtcctgcaggacctggtgtgcaaaaagtgtcatggtgtgaaggagacacacatgcctgtg
tactgcagctgtgctggagacttcaccctcaccatctcctcccaggtcttcatggaccac
gtccgtgtcttccagaacattgcccagcactatggcatggcctacctgctggaaaccatt
gagtggctgctgcacaccaacctccagctccagcagtga
DBGET
integrated database retrieval system
