Onychostruthus taczanowskii (white-rumped snowfinch): 121344568
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Entry
121344568 CDS
T07590
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otc03000
]
121344568 (RC3H1)
04121 Ubiquitin system [BR:
otc04121
]
121344568 (RC3H1)
Transcription factors [BR:
otc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121344568 (RC3H1)
Ubiquitin system [BR:
otc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121344568 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121344568
NCBI-ProteinID:
XP_041276600
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GPVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYESALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPARVPADLPSVSVTKQLQMVPRGSQLYSAQQADMFYQDPRGA
APSFEPAPYQQGVYYPTQSMSRFVRPPPSAAEAGAPYLEHYGPYLPERVVSPQYPQPQGY
PTLAQPVYPPHYDGRRVYPPVQPYQREDVVRGSPVPIDIPQAPVPLYVPEARERYQQTEP
YCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EIFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANV
DSKAMREQRLDMQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQG
AATKSIISDYSPYETHGGWGGSPYSPHQNIPSQGRFSDRERLSMSDVAGHGKQLPSADRE
QQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMESQSSLDMKNKLGTTKQTENGQLEPQNKVPAEDLTLTFS
SDVPNGSALTQENIGLLSNNMASLSLSEDPEGGGDGHDSQRGGVTPTSAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
ttcgacgaaacgatccggaagcccatcagcttgggctgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgtccctttgaccagaccactatcaacacagac
attgaactccttcctgtgaactcagccttgctgcaacttgtgggtgctcaggttcctgag
cagcagccgatcactttatgcagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattggcattgtacctcaaaccactcagcagtgcaagaggtgtgggt
cttaacagtactactcagagcgtgctgagtcgtcccatgcagaggaaacttgtgacctta
gtccattgccagctggtggaggaggaagggcggatcagagccatgcgtgcagcacggtcg
ctgggtgaaagaacagtcacagagctcatcctccagcatcaaaaccctcagcagctctcc
tccaacctctgggctgcagtgagagccagagggtgccagttccttgggccagcaatgcaa
gaggaggctctaaagctggttctgctggctttggaagatggatctgctctgtcacgaaag
gtcttggttctctttgtggtgcagagactggagccgcgattccctcaggcttccaagact
agcattgggcatgttgtccagctcctttacagagcctcgtgcttcaaggtgaccaagcga
gatgaggattcctccctgatgcaactgaaggaggaattccggacttacgaagctctgaga
agggaacacgattcccagatagttcaaatagctatggaagcgggtttgcgcattgcgcca
gaccagtggtcctcgctcttgtatggagaccagtctcacaaatcccacatgcagagtatc
attgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacttgaatcgtcttagacctcacctagagctccta
gcaaatattgatcccagtccagatgctccacctccaacatgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaaa
aaaggaacagatcaacaacagccccctcagcacagcaagtacaagacatacatgtgccga
gacatgaagcagagaggaggatgtccccggggggccagctgcacctttgcacactcacag
gaggagctggaaaaattccgtaaaatgaacaagcgtctcgttcccagaagaccccttagt
gcctccctgggccagctgaatgaggtgggcctgccttcaggagctatcctctcagaggaa
gggccagtggacttgcccaataggaaaacttctgctctgccaaacggaattgtgtcaaca
ggcagcacagtgacacaactgatttctcgagggactgactccggttatgaaagtgctctg
aagccagggaagatggaccacctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctgttcccaagagctctatttctgctttgccagtgaaccctcatcctgtgcctgct
cgggtgccagcagatctgccctcggtgtctgtcaccaagcagttgcagatggtaccacga
gggtctcagctgtacagtgcacaacaagcagatatgttttatcaagaccccagaggggct
gccccgtcgtttgagccagcaccctaccaacaaggagtgtactatcccactcagtccatg
tctcgctttgtccgacctcctccgtcagcggccgaggcgggtgctccgtacctggagcac
tacgggccgtacctgccggagcgcgtggtgagcccgcagtacccgcagccgcaggggtac
ccgaccctggcacagcccgtgtaccccccgcactacgacggccgccgcgtctaccccccc
gtgcagccctaccagcgggaggacgtggtgcggggcagcccggtgcccatcgacatcccg
caggcgcctgtgcccctctacgtacctgaggccagagagcgataccagcaaactgagcct
tattgcccggtggctccgcatcttggtcagatcagaccttcgtgccacaggcctcatccc
agcctggatgaacttcaccgacgaaggaaagagatcatggcccagctggaagagaggaag
gtgatttctccacctccttttgcaccatcaccaaccttgcctcatccttttcactcagag
gagatttttgtttttgtacagtacttggatgaagacctgaaggtagctgggaaatacaaa
ggaaatgactacagccagtactctccctggtcctgtgacaccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcaaggagtgtggagatggcgaatgtg
gacagtaaagccatgcgtgagcagcgtctggacatgcagcgccgagcggccgaggcgggc
gacgatgacctcattccgtttggagaccgaccgactgtgtcaagatttggggccatctcc
cgtacttccaaagccatgtaccagaactctgggcccatgcaggccatggcagttcaggga
gctgccaccaaatccatcatttcagactacagtccttacgaaacccacggtggctgggga
ggctctccatattctcctcatcaaaatataccttctcagggacgtttcagtgacagggag
aggctgtccatgtcggatgtggctggtcatgggaagcagttgccctcagctgaccgagag
cagcagctgcgcatggaactgcagcaagttgaccatcagatcagccagcagacccaaatg
agggggctggaggctgttagtaacaggctgctgttgcagagagaggcgactaccctggca
ggccaaccacagcccccacccccacctcccaagtggcctgggatgatctcaagtgaacag
ctgagcttggagctacaccaggtggaaagggaaattgggaagagaacccgtgagctgagc
atggagagccagtcttcactggatatgaaaaacaagctgggcaccactaaacagacagaa
aatggacaactagaaccacaaaacaaggttccagctgaggaccttacactgacattcagc
agtgatgttccgaatggatcagctttgacccaagagaacattggcctcctgtcaaacaat
atggcatctctcagcctgtcagaggaccccgagggaggaggagatggccatgactcccag
agagggggagtgacacccacatctgctccatga
DBGET
integrated database retrieval system
