Onychostruthus taczanowskii (white-rumped snowfinch): 121344847
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Entry
121344847 CDS
T07590
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121344847 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121344847 (CPSF3)
03019 Messenger RNA biogenesis [BR:
otc03019
]
121344847 (CPSF3)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121344847 (CPSF3)
Messenger RNA biogenesis [BR:
otc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121344847 (CPSF3)
U7-dependent histone pre-mRNA processing factors
121344847 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
121344847
NCBI-ProteinID:
XP_041277063
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MPFRVARAAQARRGGGRRRERGAMAAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIIL
EFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFK
GRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIK
FWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTH
IHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYY
ASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPG
MMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDY
ISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRN
TEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMST
VTQTQAIPYTGPFNLLSYQLQKLTGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVAN
PANDMYADTVTTVILEVQSNPKIQKAAVSKISKKIDMDVYRKRMEIMLQDMFGEDCVSSK
DDSVLCITVDGKTANISLDTRTVDCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccgttccgggtcgcgcgggcggcgcaggcgcggcggggcggcggaaggcggcgggag
cgcggcgccatggcggccaagcgcaaagccgaggcgctgatcccggccgaggagagcgac
cagctgctcatccggcccctaggggctggccaagaagtaggaaggtcatgcatcattctg
gagtttaaaggaagaaaaataatgcttgactgtggaatccatcctgggctggaaggaatg
gatgctcttccttacattgatttgatagatccagctgagattgatctcctccttattagt
cacttccatttagatcactgtggggctttgccatggtttttacagaaaacaagttttaag
ggaaggacatttatgactcatgccacaaaagctatttacagatggcttctttcagactat
gttaaagtcagtaacatctcagcagatgacatgctgtacacagaaacagacctcgaagaa
agcatggacaagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaa
ttctggtgctaccacgcaggccacgttctgggagcagccatgtttatgattgaaatagct
ggtgtgaagctgttatatacaggtgatttctcaaggcaggaagacagacacctgatggca
gctgagattcccaatattaaacctgacattcttataattgaatccacatacggcactcac
attcatgagaagagggaggagcgggaggcgcggttctgcaacaccgttcacgacatcgtc
aacagagggggccgaggtctcatccctgtgtttgccctgggtcgagctcaagaactgctc
ctaatcttagatgaatactggcagaatcatcctgaactccatgatattcccatatactat
gcctcctctttggcaaagaaatgtatggcagtttatcagacctacgtcaatgccatgaat
gacaaaatccgcaaacaaatcaacatcaacaatccttttgttttcaagcatattagtaat
ctgaagagtatggaccactttgatgacattggccccagtgttgtgatggcttccccaggt
atgatgcagagtggcttatccagggagttgtttgagagctggtgcacagataagagaaat
ggagtcattattgcagggtactgcgtggaaggaactcttgctaagcacatcatgtctgaa
cctgaagagatcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattat
atttctttctctgctcacacagattatcaacaaaccagtgaatttatccgggctctgaag
cctccacatgtgattttagttcatggtgagcagaatgaaatggccagattgaaagcagca
ttgatacgggagtatgaggataatgatgaagttcatatagaagttcataatcctaggaat
actgaagctgtgacattaaacttcagaggagaaaaacttgccaaggtgatgggatcttta
gcagataagaaaccagagcaaggacagagaatttctggaatcctagttaaaagaaatttt
aactatcacatcctttctccatgtgacctctctaattacacggacttggcgatgagcaca
gtgacgcagacacaggccattccctacacgggccctttcaatctgctctcttaccagctg
cagaaactcaccggtgatgtagaagaaatagaaatccaacaaaaaccagccctgaaggtt
ttcaaaaatattactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaat
cctgctaatgatatgtatgcagacactgtgacaacagtgatcttggaagttcagtcaaat
cccaaaatacagaaagctgcagtaagtaagatttccaaaaaaatagatatggatgtatat
aggaagagaatggagatcatgcttcaggacatgtttggagaggactgtgtgagttccaaa
gatgactctgtgctgtgcatcacagtggatggaaagactgccaacatttccctggacact
cggacagttgactgtgagccaggaagcgaagacgacgaatcccttcgtgaaatggtggaa
ctggcagcacagaggctttatgatgccctcagccctgtctactga
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