Onychostruthus taczanowskii (white-rumped snowfinch): 121345843
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Entry
121345843 CDS
T07590
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03030
DNA replication
otc03420
Nucleotide excision repair
otc03430
Mismatch repair
otc03440
Homologous recombination
otc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121345843 (RPA1)
03420 Nucleotide excision repair
121345843 (RPA1)
03430 Mismatch repair
121345843 (RPA1)
03440 Homologous recombination
121345843 (RPA1)
03460 Fanconi anemia pathway
121345843 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otc03000
]
121345843 (RPA1)
03032 DNA replication proteins [BR:
otc03032
]
121345843 (RPA1)
03400 DNA repair and recombination proteins [BR:
otc03400
]
121345843 (RPA1)
Transcription factors [BR:
otc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121345843 (RPA1)
DNA replication proteins [BR:
otc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121345843 (RPA1)
DNA repair and recombination proteins [BR:
otc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121345843 (RPA1)
MMR (mismatch excision repair)
121345843 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
121345843 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
121345843
NCBI-ProteinID:
XP_041279025
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSARCVCQVNRFIVNSLKDGRRVVILMDVNVLQTADQVGGPIGNPQPYNEG
QGQRPAAPAGNPAASKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAPSGLKTPGGSQIKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISDLENTPKDSIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
ASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggggccatcgcggccataatgcaaggggaggaagtcagc
aagcccgtgctgcaagtcatcaatacacgggctattgccacgggaactgggcccccacgg
taccgagtgctgatgagtgatggggtgaacaccctctcctcattcatgttggcaacacag
ctgaactccctggtggaagaggaacgcttgtcagcccggtgtgtttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggtgatcctgatggatgtaaacgtc
ctgcaaactgctgatcaggttggtgggcctattggcaatccccagccatacaatgaggga
caagggcaacgtcctgcagctccagcaggaaacccagcagccagcaaaccacagcagcaa
aatggcaatttgtctggagcaggtcctgctgctcccaagtaccacgctccctccaatcag
tttggaaaagcaagtgctcccagtggcctgaagacacctggggggtctcagatcaaagtg
gtgccaattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacc
caaaaaggtcagatccgcacgtggagcaactctcgtggggaaggaaagctcttttccata
gagctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattatagtgaaagctaacaatagagaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacactgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcagaagcctgtctgtcctgtcctccagtacagttgtcatcaatcctgat
agcccagaggctttcaagctccgaggatggtttgactccgaggggcagcttctggaatgt
gcctccatctctgatgtgaggggtgggccagcagctggagcaaataccaactggaaaact
ttgtttgaagccaagtctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaactgcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcagaacggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaagtaccgcctgatgctcctggtgaccattgcagactgtctg
gagtatcagtgggtgacttgttttcaagacacagcagaattcattcttggccaaaatgca
gctttcctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaat
gcaaacttcaacacctacgagttcaggatccgggtgaaactggagacttacaatgatgaa
tctcgtattaaggccacagcaatggacgtcaaacccgtgaactacagagaatacagcaag
aggttgattgccaacatcaggagaaatgctcagctgggatga
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integrated database retrieval system
