Onychostruthus taczanowskii (white-rumped snowfinch): 121346138
Help
Entry
121346138 CDS
T07590
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121346138 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otc03000
]
121346138 (ARID1B)
03021 Transcription machinery [BR:
otc03021
]
121346138 (ARID1B)
03036 Chromosome and associated proteins [BR:
otc03036
]
121346138 (ARID1B)
Transcription factors [BR:
otc03000
]
Eukaryotic type
Helix-turn-helix
ARID
121346138 (ARID1B)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121346138 (ARID1B)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121346138 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
121346138
NCBI-ProteinID:
XP_041279588
LinkDB
All DBs
Position
Unknown
AA seq
2369 aa
AA seq
DB search
MIMAAQVAAAPASANNSKGKAPSLPGGLGPERGPGGAGAPGPGPALGVGEGSPAGGNSVN
NLDHHLHHHHHRSEPPNMANNAAPAAAAGNNNNNASGGGSSSEPALKEGGSSSELSSSSS
SSSSSSSSSSNPGSAMETGLLPNHKLKSVGGDHPAAPPHHHHAHHPHHHAHHHHAHHPHH
HHHALQQQLNQFPPPPPQQPPPQHHPVQNNNSSLGGGGGGSGSNNNGGGGGGAAQPSADM
EQQQHGGKDSVLGAQAEPPQQPQQMLNKGADEEEMPGKMGEPIGGRYDHPGLGPLGGQQQ
PQQPPPSAGSGGGGLGGGGSGGGGGGPSAVGVSEFNSYYGNPAPASSATASRAGPCFDQH
GGQQSPGMGIMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRGPSGGGAGGGGGAGAVA
AAAAGAGGGGYGGSAAGYGVLSSPRQPGGGMMMGPGGGAGLGKAGAGAAAAAGGFARFSG
QNQHPSGATPTLNQLLTSPSPMMRSYGSSYPDYSSPSAPPQPQPQAAAAAPGSQQAAAGM
GMGKDMGAQYGAANPAWAAAQQRNHPAMSPGNTGQAISRTQGSPMDPMVMKRPQLYGMGN
NPHSQAQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQYGQQGVSGYC
QQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPVAPGKPNHEDL
NLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTETTLSSAVSASGSTSSQGEQS
NPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQS
ESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSFQQ
SNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGS
MPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA
ANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTGNAPM
GLADMMTPGESKLPLPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPS
SASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLT
FMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAA
SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQST
GSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNA
PYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAM
SNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDG
MYGPPAKRHEGDMYNMQYGNQQQEMYNQYGNAYTGPDRRPMQGQYPYPYNRERMQGPGQM
QQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTD
DMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSP
ASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEAS
QPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQL
SGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKDENDEC
IDYFDEDEEEGEDEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVV
DRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLE
GKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLE
DEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLIL
LHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAY
TESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLIL
ATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLI
SFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEG
RLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtcgcagcggctccggcgagtgcgaacaacagcaagggcaaa
gccccgagcctgccgggcggcctgggcccagagcgaggcccggggggggccggggctccc
gggccgggccccgcactgggggtcggcgaggggagtccggccggcggcaacagcgtgaat
aatttagatcaccatctccaccaccaccaccaccgcagcgagccgccgaacatggccaat
aacgcggctcccgccgctgccgccggtaacaacaacaacaacgccagcggcggcggctcc
tcctcggagccggctctgaaggaaggtggaagctcctcggagttatcttcatcttcttcg
tcttcttcctcctcctcctcctcctcctccaacccgggctcggctatggagacggggctg
ctccccaaccacaagctgaagagcgtcggaggcgatcaccccgccgcgccgccccaccac
caccatgcccaccacccgcatcaccatgcccaccaccaccatgcccaccacccgcaccac
caccaccatgcactacagcagcagctaaatcaattcccgccgccgccgccgcagcagccg
ccgcctcagcaccatcccgtgcagaataacaacagcagcctcggcggcggcggcggcggc
agcggcagcaacaacaacggcggtggcggtggcggcgctgctcagcccagtgcagacatg
gagcagcagcaacatggaggaaaagacagtgttttgggcgctcaggccgagcccccccag
cagccgcagcaaatgctgaataaaggcgccgacgaggaggagatgcccggcaagatgggc
gagcccatcggcggccgctacgaccaccccggcttgggacccctgggcggacagcagcag
ccccagcagccgcccccgagcgctgggagcggcggcggcggcctcggcggcggcgggagc
gggggaggcggcggcggcccctccgcggtgggtgtctcggagttcaatagctattatggc
aaccctgcccctgccagcagcgctacggcgagccgcgccgggccttgctttgatcaacat
ggcggacaacaaagccccgggatggggataatgcaccccacggcggcccccaacagcatg
gaccccctgcagaactcccacgaagggtaccccaacagccagtacaaccactacccgggc
tacggccgcggccccagcggcggcggcgcgggcggcggcggcggcgcgggagccgtggcg
gcggcggccgctggggcaggcggcggcggctacgggggctccgcggcgggctacggggtg
ctgagctccccgaggcagcccggcggcggcatgatgatgggccccggcggcggagccggc
ctcggcaaggctggtgccggcgcggcggcggcggccggcggctttgcgcggttctccggg
cagaaccagcacccgtccggagccacccctaccttgaaccagctgctcacgtcccccagc
cccatgatgcggagctacggcagcagctaccccgactacagcagccccagcgccccgccg
cagccccagccccaggcagcggcggccgccccgggaagccagcaggcagcggcgggcatg
ggcatgggcaaggacatgggcgcccagtacggagcggcgaacccggcctgggcagcggct
caacaaaggaaccacccggcgatgagccccgggaacaccgggcaggccatcagcaggacc
cagggcagtccgatggatccgatggtgatgaagaggccgcagctgtacggcatgggcaat
aaccctcactctcaggcacagcagagcagcccctaccccgggcagtcctacggccctccc
ggcccccagcgctatcccgtgggaatgcagggccgagccccggcagccatgggaggaatg
cagtatccacagcaacagatcccacctcagtacggtcagcaaggtgtgagtggctactgc
cagcagggccagcagccgtactacaaccagcagccgcagccccagcacctgccgccccag
gcacagtacctgtcgcaggcccagcagaggtaccaggctcagcaggacatgtctcaggaa
ggctatggaaccagatctcaaccccctgtggccccaggaaagcctaaccatgaagacttg
aatctaatccagcaagaaagaccatcgagtttaccagttgaagtcttggcctccgaggat
gctacatttggacacaaggatttatctggatccattgacgacttgccgactggaactgaa
acaaccctcagctcagctgttagcgcatcgggctctacgagcagccaaggggagcagagc
aaccctgcacagtctccgttttcccctcatgcttctccacatctctctggcatccctggg
ggcccatcaccttcccctgtaggctctcccgttggaagcaaccagtcaagatctggtccc
atttctccagcgagtattccaggcagtcagatgccaccgcagcctcctggcagccagtca
gaatccagctcccaccctgccttgagccagtcaccaatgccacaggaccgaggttttatg
gcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaaactggaccttcc
atgtcaccacacccctcacctggaggtcaagtgcatcctggaattggtagctttcagcag
agtaattcaagtggtacttacgggcctcagatgagccagtatggaccacaaggaaactac
tccagaccaccgacgtacagcggtgtccccaacacaagttacagtggcccaggacccggc
atgggtataaatgccaacagtcagatgcatggacaggggccaagccagccttgtggttcc
atgcccctgggacggatgccatcagctgggatgcagagcagaccatttcctggaaacatg
agcagtatgacccccaattctcctggcatgtctcaacagggaggccctgggatgggccca
cccatgccaactgtgaaccgtaaggcacaggaggcggctgctgcagtgatgcaggctgct
gcgaactccgctcagagcaggcaaggcaattttcctgccatgaatcagagcgggattatg
ggatccagctccccctacactcagccgatgaacaacagctctggcctgatgaacccacag
gctcctccttatagcatggcccccaacatggtgaacagctcaacaggtaatgcacctatg
ggtcttgcagatatgatgacacctggtgagtccaaacttccccttcctctcaaagcagat
ggcaaagaagaaggagctccccagcccgagagcaagtcaaaggatagctacagctctcag
ggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagc
tctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctgg
ccaaagactccatcaagccctaaatcaagttcctctaccacaactggagagaagatcact
aaagtctatgagctaggaaatgagccagagcgcaagatgtgggtggatcggtacctgacg
ttcatggaggagaggggcacgcctgtggccagtctgccagctgtgggcaagaagcccttg
gacctgttcaggctctatgtctgcgtcaaagagattggaggtttagcacaggttaataaa
aacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcgagcagcgcagcc
agctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagattgagcga
ggggaggagccccctccagaagtcttcagcactggagataccaagaaacaacctaagatt
cagccgccatctcctgctaattctggttccttgcaaggcccacagactccacagtccact
ggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacaccagcatccaca
cctcatggacagatgacacctatgcagggtggcaggaacagcgccgtcagtgtgcatgat
cccttttctgatgtgagtgattcagcgttcccaaagcgaaactccatgacgccaaatgca
ccataccagcagggaataaacatgccagatatgatgggaaggatgccatatgagccgaat
aaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatgacccct
ggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctggagcaatg
tccaacatgagcatgagccagcgacagcagttctcttatggaagtggctatgacaggagg
catgaaccatatgggcagcagtatccaggacaaggacctccctcaggacagccaccatat
ggaggacatcaacctggaatgtatccacagcagcagaactacaagagacacatggatggc
atgtatgggcctccagccaaacgccacgaaggggatatgtataacatgcagtatggcaac
cagcagcaggagatgtacaaccagtacggcaacgcttacacagggcctgacaggaggccc
atgcagggacagtacccatatccatataacagggaaaggatgcagggcccaggacaaatg
cagcagcatggaatacctccccagatgattggtggccccatgcagtcgtcatcctccagt
gaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttaccagaac
aggcaaggtccaggaggccccgcacaggcccctccgtatccaggaatgaatcgcactgat
gatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcatgtcaac
caacggcagccttcttatatgtcatcctcagcctccatgcagcctatcactagacctcct
cagtcatcctaccagacaccaccctctatgccaaaccacatctccagagctccaagtcca
gcatctttccagcgctctttggaaaaccgtatgtctccaagcaagtctcctttcctaccc
tccatgaagatgcaaaaggttatacccacagttccagtgtcacaggtcacaggacctcca
ccccaaccaccaccgattaggcgagagattaccttccccccaggctctgtagaagcctcc
caaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgaggcc
tggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcgctagac
actattaatattcttctgtatgatgacagcactgttgctactttcaacctctctcagttg
tctggatttcttgagcttttagtagaatattttagaaaatgcctgattgacatttttgga
atccttatggaatatgaagtgggagatccaggccacaaagcacttgatcacaaagcagcc
aagaaagatgatagtcagtccttggcagaggatactggaaaagatgagaatgacgaatgt
attgactattttgatgaagatgaggaggagggggaggatgaaaaggtagaaggagaagaa
aagagcattgttttttctactcctggtgccattgctgatccaagtgagaggccaaaacaa
gccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctatttgttgtt
gaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccactggcag
cttggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatggagatt
ccaccacgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggacctcgag
gggaaaggtgaatctgaggagcaacaagaaaagagtataacagcaaccattgatgatgtt
ctctcagctcggcccggagcactacctgaagactcaaactctggttcccaaacagagagc
agtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaactgctagag
gatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaagactcc
ttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcctggc
aatgacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttgatcctt
cttcaccacgagcatccagaaagaaagcgagcgccgcagacttacgagaaagaggaagag
gaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtcttg
agggataatacattggtcacattagccaacatttctgggcagctagacttgtctgcttac
acagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgcccgtct
gcagaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcagaga
cttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatcttg
gccacccccccattcagccgtcaggagaaactctacgctactttagttaggtacgttggg
gaccgcaaaaatccggtctgccgagaaatgtccatggcgctcctatcgaaccttgcccag
ggggacacattagcagcaagggcaatagccgtgcagaagggaagcattggaaacttgata
agcttcctggaggatggggtcactatggcccagtaccagcagagccagcataacctcatg
cacatgcagcctccgcctctggagccgcctagcgtagacatgatgtgcagggcagccaag
gccttgctggccatggcgagagtggacgagaaccgctccgagttccttttgcacgagggt
cgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatctgt
gatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
