KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121346693
Entry
121346693         CDS       T07590                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03018  RNA degradation
otc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121346693 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121346693 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otc03019]
    121346693 (LSM4)
   03041 Spliceosome [BR:otc03041]
    121346693 (LSM4)
Messenger RNA biogenesis [BR:otc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121346693 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     121346693 (LSM4)
Spliceosome [BR:otc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    121346693 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 121346693
NCBI-ProteinID: XP_041280659
LinkDB
Position
Unknown
AA seq 138 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq 417 nt   +upstreamnt  +downstreamnt
atgctgcccctgtcgttgctgaagacggcgcagaaccaccctatgctggtggagctgaag
aacggggagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgggaggttatctgcacgtcgcgggacggggacaagttctggaggatgccagagtgctac
atccgtggcagcaccatcaaatacctgcggatccctgacgagatcattgacatggtgaag
gaggaggtggtgtccaagggcagaggccgtggtgggatgcagcagcagaagcagcagaag
ggccgtggggttggaggagctggacgaggtgtgtttggtggccgtggccgtggaattcca
ggcagtggaagaggccagcaggaaaaaaagccaggcaggcaatcagccaagcagtga

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