Onychostruthus taczanowskii (white-rumped snowfinch): 121346735
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Entry
121346735 CDS
T07590
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121346735 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otc04990
]
121346735 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
otc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121346735 (PDLIM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
DmmA-like_C
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121346735
NCBI-ProteinID:
XP_041280725
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MLSTAGHGEGVWVWGLLPALEAQPRKFFRAASQAPLCALGIFNIPGGCGRGARCRTGCPV
PDGLPSSPRLWRDGWDGIWCGFRRCGCTSPPIPSEPSAVPLTGVPRGPCATPGGSSASFT
SVDLLWGEGLGLLGVGRCCGEQQNPSLAATSSPPNRTGSALPGHSAGLAAKASPISCLAP
APGNDLGCLSCTAGCLGPPGPGEEAASLGGQEEAAVAADTQRRPGSPPRKESAAGAGDPQ
GAAGTGRPSLCGLAAAAMPVTVTVTLPGPAPWGFRISGGRDFGKPITVSKVTEHGKAATG
DLRPGDVIVTINGESTAEMLNVEAQNKIRQSPGQLRLDVERSPVPSPSHTNGDTSPEMLA
SRFQDTLQVPSESRSALRTLDPGLASLTHPPGSASSQPLEQEFTCPGLPQVRRLSRQSSS
QGAVLPPPPRPPSPELGAPQNPWATPRERRLSSPCPSTWPSQGSEPAMRRLEEDSEVYKM
LQQNRELRAAPRQSSTFRLLQEALEDEEGGGPAAPFPSRLSAGARKPVAGVQKLHVCEKC
GSSIATQAVRIQDGRYRHPSCYTCADCGLSLKMRGHFWVGDELFCEKHARLRYQGPPGGP
VPRPVSPRS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcacggctgggcatggggagggggtttgggtttggggtttgctcccggcgctg
gaagcccagcccaggaaattcttccgggcagcctctcaagcccctctttgtgctcttggg
atttttaacattcccggcggctgcggacggggtgcccggtgccggacggggtgcccggtt
ccagatgggctgcccagctctcccaggctgtggcgggatgggtgggatgggatctggtgt
ggatttaggagatgcggctgcacatccccacccatcccatctgaaccaagcgctgtgccg
ctcaccggggtgccacggggaccctgtgccacccccgggggatcctcagcgtcctttacc
agtgtggatttgctgtggggtgaaggactggggctgctgggtgtcggacgctgctgtggt
gagcagcagaacccgtccctcgctgccacatcctcccctccaaaccgcactggctcagct
ctgccaggccacagcgccggccttgctgccaaggcgtcaccgatttcctgccttgctcca
gctcctgggaacgaccttggctgtctcagctgcaccgccgggtgcctgggaccccccggc
ccgggggaggaagccgccagcctcgggggacaggaggaagcggcggtggctgctgacacc
cagcgaagacctgggtcccctccccggaaggaaagcgctgccggtgctggggaccctcag
ggtgcagcggggacagggaggccctcgttgtgtggtctagccgccgctgccatgccggtg
acggtgacagtgacactgcccggcccggccccgtggggcttccgcatctccgggggaaga
gatttcgggaagcccatcaccgtctccaaggtgacggagcacgggaaggcggccacgggt
gaccttcggccgggagatgtcattgtcaccatcaatggggagagcacggctgagatgctc
aacgtggaggcgcagaacaagatcaggcagagcccggggcagctgcggctggacgtggag
aggtccccggtgccatctcccagccacaccaacggggacacctcgccagagatgttggcc
tcgcgtttccaggacacgctgcaggtgccaagtgagagccgaagtgccctgaggaccctc
gaccccggcctggcatccctcacccacccacctggcagtgccagctcacagcccttggag
caggagtttacctgtcccggcctcccccaggtgcgacgcctgagccgccagagcagctcc
cagggggccgtcctgcctccccccccgcgcccaccctcaccggagctcggagccccccaa
aacccctgggcaaccccccgggagaggcgcctctcctccccctgtcccagcacctggccc
agccagggctcggagccggccatgaggcgcttggaggaggactcggaggtctacaagatg
ctgcagcagaaccgggagctgcgggcggccccgcggcaatccagcaccttccgcctgctc
caggaggcgctggaggatgaggaaggaggaggccccgcagcccccttccccagccggctc
tcggccggggcccgcaagcccgtggccggggtgcagaagctgcacgtctgtgagaagtgc
gggagcagcatcgcgacacaggcggtgcggatccaggacggccgctaccggcacccgtcc
tgctacacctgcgccgactgcggcctcagcctgaagatgcgcggccacttctgggtgggg
gacgagctgttctgcgagaaacacgcccgcctgcgctaccagggacccccgggggggccc
gtgccccgtcccgtgtccccccgctcctga
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