Onychostruthus taczanowskii (white-rumped snowfinch): 121347004
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Entry
121347004 CDS
T07590
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04142
Lysosome
otc04144
Endocytosis
otc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121347004 (CLTC)
04142 Lysosome
121347004 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121347004 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121347004 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otc04147
]
121347004 (CLTC)
Membrane trafficking [BR:
otc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121347004 (CLTC)
Exosome [BR:
otc04147
]
Exosomal proteins
Proteins found in most exosomes
121347004 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
121347004
NCBI-ProteinID:
XP_041281185
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQLCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccggagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgctgcaaatctttaacatcgagatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgcc
ctcgtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgctggctgccagatcatcaactacagaactgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtagtgggggca
atgcagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatctactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtatggc
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcatgaagcaacagctggaattattggagtcaacaga
aagggacaggtgctctcagtgtgtgtggaagaggagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcgggggct
gaggagctctttgccaggaaattcaatgcactctttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccagggcagacttccccactcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctcg
gaggagctgggagatcttgtgaaatctgtggatcctacactagcacttagtgtctatctg
agagccaacgttccaaacaaagtcatccaatgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactcgagcacttcacagacctctacgacatcaagcgtgcggta
gttcacactcacctcctcaaccctgagtggttagtgaattattttgggtccttatcagta
gaggactctctggagtgtctgcgtgcgatgctgtccgctaacatccgtcagaacctgcag
atctgtgtccaggtggcttccaaataccatgaacagctgtcaacacagtccctcattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacaggacaa
attaaagaagtggagagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctgcctctcatcattgtgtgcgaccgc
tttgactttgtccacgacttggtgctgtatttgtatagaaataatctccaaaaatatatt
gagatttatgtacaaaaggtgaatccaagccgtctgccagttgttattgggggactgctt
gatgtggattgctctgaagacgtgatcaagaacctcatccttgtagtgagaggtcaattt
tcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaagctgcttctgccc
tggctggaagcaagaattcacgagggctgtgaggagcctgccactcacaatgcactggcc
aagatatacattgacagcaacaacaacccagagagattcctgcgtgagaatccctactat
gacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgcgtggct
tacgagcgtggacagtgcgatctggagctgattaatgtgtgcaatgagaactccctcttc
aagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgggccagtgtgctg
ctggaaagcaacccctacagaagacccctgattgaccaggttgtgcagactgcgctgtca
gagacccaggaccccgaggaagtctctgtcactgtgaaggccttcatgactgcagatctt
cccaatgagcttattgaactgctggagaaaattgttctggataattcagtgttcagtgag
cacaggaacctgcagaaccttctcatccttacagctatcaaggctgaccgcacccgtgtc
atggagtacatcaatcgcctggataactacgatgcccctgatatagccaatattgctatc
agcaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtacgagttcgccgag
cgctgcaatgaacctgcagtgtggagccagctggccaaagcacagctccagaaggggatg
gtaaaggaagcaattgactcctacattaaagcagatgatccttcctcatacatggaggtt
gttcaagctgctaatgccagtggaaactgggaagaactggtgaagtatctgcagatggca
cgcaagaaggcccgggagtcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgcctggcagagctagaggagttcatcaatggccccaacaatgcacatatccagcag
gttggtgatcgctgctatgatgagaagatgtatgaagcagccaagctcttgtacaacaac
gtgtccaacttcggccgcttggcctcaaccttggtgcacctcggcgagtaccaggcagcc
gtggatggcgctcggaaagccaacagcactcgcacgtggaaagaggtctgctttgcttgt
gtggatggaaaagaattccgcctggctcagctgtgtgggctccatattgtagtgcatgca
gatgagctggaagagctaatcaactattaccaggatcgtgggtactttgaagagctgatc
actatgttggaagcagcactggggctggagcgagcacacatggggatgttcacagagctg
gcaattctctactccaagttcaagccacagaagatgagggagcacttggaactgttctgg
tccagagtcaacattcccaaggttctgagagctgcagaacaagcccatctgtgggctgaa
ctggttttcctgtatgataagtatgaagaatacgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaat
gtggagctgtactacaaggcagtccaattctatttggaatttaagcctctgctgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcacgttcttcaca
aaggttaaacagctgcccctggttaagccttacctgcgctctgttcaaaatcacaacaac
aaatcagtcaatgagtccctcaacaacctcttcattattgaagaagattaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgcccaacgtttggag
aagcacgagctaatagagttccggaggatcgccgcctatctcttcaaaggcaacaaccgc
tggaaacagagcgtggagctctgtaagaaggacaggctctacaaggatgccatgcagtac
gcttccgaatccaaagatactgagctggcagaagagctgctgcagtggttcttgcaggag
aacaagagggaatgctttggagcttgtctcttcacctgctacgatctcctaaggccggat
gttgtcttggaaacagcgtggaggcacaacattatggactttgccatgccatactttatc
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggccagccccagctgatgctgacagcaggacccagcgtggcagttcctccacaggca
cctttcggctacggctacacggcccctccgtacgggcagccgcagcccggcttcggctac
agcatgtga
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integrated database retrieval system
