Onychostruthus taczanowskii (white-rumped snowfinch): 121347490
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Entry
121347490 CDS
T07590
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc00100
Steroid biosynthesis
otc01100
Metabolic pathways
Module
otc_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121347490 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
otc01006
]
121347490 (FDFT1)
Enzymes [BR:
otc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121347490 (FDFT1)
Prenyltransferases [BR:
otc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121347490 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
121347490
NCBI-ProteinID:
XP_041282123
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSHLYQPDWKYTESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQREWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTDLANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDVAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQVIASIRAISLPGSPMASRHHYSPIYLSCAMLLAALSWQYLSTLSKATEEYVQAGDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggaaatggctgggccaccccgaggacatctacaacctgctccgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgcggc
ctccgcacctgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcatccag
gcgctggatggagagctgcgacatgcagtgtgtatattctacctagttctccgtgccctg
gacactgtagaggatgacatgagcatccccttggatgtcaaggtcccgatgctgcacgag
ttccactcccatctctaccagccagactggaagtacacagagagcaaggagaaggacagg
caggtgctggaagacttcccaacgatctccatggagttcagaaacctgtccaaggtctac
caggatgtgatttcggatatttgtcacaagatgggggttgggatggcagagttcttggag
aagaaggtggattctcagcgtgagtgggacaagtattgtcactacgttgctgggctggtg
gggattggcctttcccgtctcttctctgcatcagagctggaagattccatcgtagggcag
gacacagacctggcaaactccatgggcctcttcctgcagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatat
gccaagaagctctcagaccttgccaagccagagaacatcgacgtggccgtgcagtgcctc
aacgagctcatcaccaacgccctccaccacgtccccgatgtcctcacctacctgtcccgc
ctcaaaaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaggggggtggtgaagatccgcaagggc
caggccgtcaccctcatgatggatgccaccaacatccaagctgtcaaagccatcatgtac
cagtacgtggaagagatctaccagaagatcccgagcacggacccctcatccaacaagacg
cagcaggtcatcgcctccatccgcgccatcagcctgcccggcagccccatggcctcccgc
caccactactcccccatctacctgtcctgtgccatgctgctggcagccctgagctggcag
tacctcagcaccctctccaaggccaccgaggagtacgtgcaggcaggagacaactga
DBGET
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