Onychostruthus taczanowskii (white-rumped snowfinch): 121347689
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Entry
121347689 CDS
T07590
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otc03036
]
121347689 (TDRD12)
Enzymes [BR:
otc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
121347689 (TDRD12)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121347689 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
EFhand_Ca_insen
ERCC3_RAD25_C
KH_PARP14_6
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
121347689
NCBI-ProteinID:
XP_041282469
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MEVVVLKVEDPNCFWIAVKECVPGVAGETVYQNLNAEMDQFYNSYKDAEQVKQEEIKKGQ
VYVVFSEELKCWCRALVESVRCQADGYQLGCFLVDYAKYCSVPSENIRVLAEAFGKIPDR
AKKCRLYCTKPLTLHIDYCENTAKIGPAKRWDTAAIHHFRKLLEEATEVKATIQTVEDKV
LEVFLFVTIRDEKICVNDDLVAKHFAHYKEDEGTAGSSSDVSDDEVSLNAECVPVEFVGP
TFLARPKLPFGEEVSPHLGPGLAGCNSVLEKPSQRSHTDLNDNTVPVVSMVPGLPPKEDK
AVQTERLPQFLNSNFLQTHTVEDDQQSFQNVGKEKNFVFLSKKIEPSSLLETAPLFDGLK
KELAWNKFSGPTFTQSYCWPPVAGGCDVVAISHQGNDPLLYIPPVLTLLQESGYEALPNM
SGTLALILCPGWKKAQLVFDLLKTYRKGCRHLHPMLIILGQNKEAASQMEIRGCEVVVTT
PHNLLRLLEHNTGFLCRLCHLVLDEVDVLFSDTCEQVFTILDCYKKATAQTQGNRPHQII
AVGTQWNKHITPLIKEFMNDPHIVITVIEEAAIFGNVQQVVQPCMNSNRTAELLKILDFA
QRNLQKVLVFTDSVTEVEMIHKALKSNSIVSLKKHKESKCNAKCVLERWRKMHSSGTPAV
LVLTDDCQQSLGITDATWVIHFSFPSPAVFGQRLQSMSDNFSTGIKDSAVDEEDLKAKSV
ILLTENSSCHAPGILCYLKHAEVEIPEELYDLTARVQESEEDETFSRPLCAALKTFGFCR
NGTECPDRHKINLSIDMAQNSAAEMMETPERVTILPLFIVHATNYFGRIIKKQKDQYTVL
AKEMNDYFKVPGHRISVNSVEKSVFYVLREGAICHRVQVVETSAKDEENVYKVTVKYVDE
GRTSQVNSDQLLHLPVKFQSLPPQAVEIIVCRVKPIDNEVEWNPKVTDHINHKIKGKLHH
AKVVHILGKTVWVDPMVGVTSLPTMKMWINEYNIRSEILSTGLGTDNPEHVGEIQKLCTQ
IPVLDHAESLEHLPTKPETTVEKLGTSIQALLLRSTKEDTADLEEASSLQDPSIQENSAE
SCNSPVTPPSNSVVQTEEAEDSSVHQQKGCHPPIKWFQDDVSVTLKVQILRATDSKCEFS
REKVTFSAYSEGKLYVADLELYQSLIAEKSTCVIKDTEAVIFLVKEKKGTWCKLLKNKNV
HVSLDFERWEESEDERPFTVGSGKVTYPPAGSEEWFESSEDSDTESDE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgtggtattaaaggttgaggatcctaattgcttttggattgctgtgaaagaa
tgtgtgcctggtgtagctggtgaaactgtgtatcaaaacctgaatgctgaaatggaccag
ttttataacagttataaagatgcagagcaagtaaaacaagaggaaataaaaaaaggccag
gtttatgtggtgttcagtgaggagctgaagtgctggtgcagggctctggtcgagtcagtc
cgctgccaggcagatggttaccagctcggctgtttccttgtggattatgccaagtactgc
tctgttccatcagagaacattcgagttttagcagaagcatttggaaagatcccagacaga
gcaaagaagtgtcggctgtactgcacaaagccactgacactgcacattgactactgtgaa
aacactgccaaaataggaccagccaaaagatgggataccgctgctatccatcattttcga
aagcttcttgaagaggctaccgaggttaaagccacaatacagacagtagaagataaagtg
ttagaggtgtttctttttgtgactataagagatgaaaagatctgtgttaatgatgatctg
gttgcaaagcactttgctcattacaaggaagatgaagggactgcagggagttcttcagat
gtttctgatgatgaagtgtccttaaatgctgagtgtgttccagtggagtttgttggtcct
acgtttcttgccaggccaaaactgccctttggggaggaagtgtcaccacatcttgggcca
ggtcttgctggttgtaattctgttcttgaaaagccatcccaaaggtctcatacagatcta
aatgacaatactgtgcctgtggtcagcatggtgccaggtttgcctcccaaggaagataaa
gcagttcaaacagagaggcttccacaattcttaaattctaatttccttcagacacacaca
gttgaagatgatcaacagagttttcagaatgttgggaaagaaaaaaactttgtgttcctg
agcaagaaaattgaaccatcatcacttttggaaacagcaccactttttgatggtctgaaa
aaggaacttgcttggaacaagttttcaggccctaccttcacccagtcctactgttggcca
ccagtagctgggggatgtgatgtcgttgccatctcccatcagggaaatgatcctttatta
tatattccaccagttcttacccttttgcaggaaagtggctatgaagccttgcccaacatg
agtgggacactagcactgattttatgtcctggatggaagaaggcacaacttgtttttgac
ctgctgaaaacgtacaggaaaggctgcagacaccttcatccaatgctgataatccttggg
cagaacaaggaagcagccagccagatggaaatccgaggttgtgaagtagtagtgactaca
ccacacaacctcctgaggctgctggaacataacactgggttcttgtgtaggctttgccat
cttgttctggatgaggttgatgtgctgttctctgacacttgtgaacaggtgttcactata
ctggattgttacaagaaagccactgctcagacacagggaaatcgaccacatcagatcatt
gctgtgggaactcagtggaataaacatatcacacccttgataaaggagttcatgaatgat
cctcacattgtgataactgttattgaagaagctgccatctttggaaatgtgcaacaggtg
gtgcaaccctgcatgaacagcaacagaactgctgagttactcaaaatcctggactttgcc
cagaggaatcttcagaaagtgctggtcttcactgactcagtaactgaagtagagatgatt
cataaggcactgaagagcaactcaatagtttccttgaaaaagcataaagagagcaagtgt
aatgctaagtgtgtcttggagaggtggagaaaaatgcacagttctggcactcctgctgtg
ttagttttaacagatgactgccagcagtccttgggaatcacagatgcaacttgggtgatc
catttcagtttcccatctccagcagtctttgggcagcgcctgcaaagcatgagtgacaac
ttcagcactggcataaaggattctgctgtagatgaggaagatctgaaggccaagtcagtc
attctgctgacagagaacagttcctgtcatgcacctgggattctctgctatttaaagcat
gcagaagttgaaatcccagaagaactctatgatttgactgctagggtacaggaatctgag
gaagatgagacattttcaagacccttgtgtgctgctcttaaaacatttgggttttgcagg
aacggaacagagtgtccagatcgtcataaaattaatttatcaatagacatggcccagaat
agtgcagctgaaatgatggaaactcctgaacgtgtgacaatcctgcctctcttcattgta
catgcaacaaactactttggtcgaataatcaagaaacaaaaggaccaatacacagttctt
gctaaagaaatgaatgattacttcaaggtaccaggacataggatttctgttaacagtgtg
gagaagtcagtgttctatgtgttacgtgagggtgccatttgccacagggttcaggtggta
gagacttcagcaaaagatgaagaaaatgtctataaggtcacagttaaatacgtagatgaa
ggcaggacaagtcaagtgaatagtgatcagctgctccacttacctgtgaagtttcagagt
ctgccacctcaggctgtggaaattatagtttgtagagtaaaacccatagataatgaagtt
gaatggaatccaaaggtgactgatcacattaatcacaaaattaaaggaaaacttcatcat
gcaaaagtggtgcatatcttgggaaagacagtttgggttgacccaatggttggggttacc
agtcttcccacgatgaagatgtggatcaatgagtacaacattcggtctgagattctgtca
acgggtttgggaactgacaatcctgaacatgtaggagaaattcagaagctgtgcacacag
ataccagttttggatcatgcagagagcttggagcatttacccactaagcccgagactact
gttgaaaaactgggaacttcaatacaggctttgttactaagaagcacaaaagaggacaca
gctgatctagaggaagcgtccagtctacaggatccatcgatacaggaaaattctgctgaa
agctgtaacagtcctgtgactcctccaagcaattctgtagttcaaacagaagaagcagaa
gactcttctgtgcatcagcagaagggctgtcatccaccaatcaagtggtttcaagatgat
gtgagtgtgacactgaaggtacaaatactgagggcaactgacagtaaatgtgagttctct
agagaaaaggtgactttcagtgcttattcagaaggcaaactctatgtggctgacctggag
ctctatcagtcactaattgcagagaagtccacatgtgtgattaaggatacggaggctgtg
atttttctggtaaaagagaaaaaagggacatggtgcaaattactgaagaacaagaatgtt
cacgtgtccttggattttgaacgctgggaagagtctgaagatgaaaggccttttacagtt
ggttctggaaaagtgacctaccctcctgcaggatctgaggagtggtttgagtcctcagaa
gacagcgatacagaaagcgatgagtaa
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integrated database retrieval system
