Onychostruthus taczanowskii (white-rumped snowfinch): 121347892
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Entry
121347892 CDS
T07590
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121347892 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121347892 (SMARCA2)
03036 Chromosome and associated proteins [BR:
otc03036
]
121347892 (SMARCA2)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121347892 (SMARCA2)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121347892 (SMARCA2)
Chromatin remodeling factors
BAF complex
121347892 (SMARCA2)
PBAF complex
121347892 (SMARCA2)
GBAF(ncBAF) complex
121347892 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121347892
NCBI-ProteinID:
XP_041282828
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPSM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMSQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGTAAGP
GAAPGMPGHTTAITPKTWTEGQAPDMGVSSTQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKIVLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKVKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagtccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccacatcccatgccatcaatg
ggacctacagattatccacaggagggaatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccggagcatgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactcccagccagccaggtcccattatagcaggagacccacaa
gttatgagtcagcctaacagagggccttcccctttcagccctgcccagctgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccctaccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacaggcagtctggtattggattacatgccatgagtggcactgctgctggacca
ggggctgcaccggggatgcctggacatacaactgccattacccctaaaacgtggactgaa
ggccaagccccagatatgggcgtctccagtacacaacaaaagcttccagcgccagcccct
agtgggaggccttctcctgctcctgctgccgcccagcctgctgccaccatgcctgggccc
tctgtaccacagcccccacctggacaaccttcacccattgtccagctgcagcagaagcag
aaccgcatcagccctatccagaagccacaaggactggatcctgttgaaatactccaagaa
cgtgaatatagacttcaagctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcggaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccaacgccagttaagacaagaggtagtagcctgtatgcgtcgtgacacgaca
ctggagacagcactgaactccaaagcctacaaacgaagcaaacggcagactttaagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
catcggtcagtcgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctatcgtaagctgattgatcaaaagaaagacagacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatagtcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgctatcactgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagcttcagggtctggagtggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacaaactattgctctcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcatcgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttcagtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaagtacatgatagtagatgagggccatcggatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaatcctgctcactgggactcctttg
cagaacaaattgcctgaactttgggctctcctcaatttccttcttccaaccattttcaag
agctgcagcacgtttgagcagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctgcataaagtgcttcggccc
ttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatacttctcacagatggttctgaaaaagacaagaaggggaaaggcggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtcctttgctgaacatctgggctactcaaatggtgtcattaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtacttcttttctgtcaaatgacatcgctcatgaccattatggaagac
tacttcgcatttcgaaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagtttaatgaacctggatcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttgaatctccaggctgctgacactgttataatcttt
gatagtgactggaatcctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaatgaagttagagtcctccgactgtgcactgtgaacagtgtggaggagaagata
cttgctgcagcaaagtataagttgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcattcctccaagctatattggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaagaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaaacctcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattt
ggaaggggatcccgtcagcgcagggatgtggattacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaagagacgaagaaacgtggataaggactccgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcgcccaatccacccaaactgaca
aaacaaatgaatgccatcattgatactgtgataaactacaaggacagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagagctaccggagtattatgaattg
atcaggaaaccagtagacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgctgctgtgtcacaatgcacagacattcaac
ttggagggatctcagatctacgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaggaagaagaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagagacaaagcagagcaaaa
gtcaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
