Onychostruthus taczanowskii (white-rumped snowfinch): 121348001
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Entry
121348001 CDS
T07590
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121348001 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otc03019
]
121348001 (CNOT6L)
Enzymes [BR:
otc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121348001 (CNOT6L)
Messenger RNA biogenesis [BR:
otc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121348001 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121348001 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
121348001
NCBI-ProteinID:
XP_041283055
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MLCSNSQLWWSFRLTGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLS
TSLWSLTHLTALHLNDNNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLL
NNNLLRVLPYELGRLFQLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQL
PPRPWITLKERDQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIV
NCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKT
EKFTLVQKHTVEFNQVAMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASMKSLHVD
KQLLIVANAHMHWDPEYSDVKLIQTMMFVSELKNILEKASSRPSSPTADPNSIPLVLCAD
LNSLPDSGVVEYLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAY
ENNLMPYTNYTFDFKGVIDYIFYSNTHMNVLGVLGPLDPQWLVDNNITGCPHPHIPSDHF
SLLTQLELQPPLLPLVNGVHLPSRRVTQIPREPGGNHLILSAKHQPRTRFN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcagtaacagtcagttgtggtggtctttcagactaacagggatgccaaaggaa
aaatatgatcctccagatcctcgcagaatttacaccatcatgtcggcggaagaggtggcc
aacgggaagaagtcgcactgggctgaattagagatctcggggagagtgcggagcttaagc
acgtcgctgtggtcgctgacacacctgactgctctgcacctcaatgacaacaaccttact
cgcattccacctgatattgccaagcttcacaatctggtttacctggatctgtcatccaac
aaactcagaagtttaccagcagaactaggaaacatggtgtctctcagggaattgctttta
aataacaatctgttacgggttttgccttatgaacttggacggctcttccagctgcaaacc
ctgggtttgaaaggcaatcctttatcccaagatattctcagcctctaccaggatccagac
ggaacccgaaagctactgaactacatgcttgacaatctagcagttcatccagagcagctg
cctccaaggccatggattactttaaaagaacgagaccaaatcctgccctcagcttcattt
acagtcatgtgttacaatgtgttgtgtgataaatacgccaccaggcagctctacggctac
tgcccctcctgggcactcaactgggaatacaggaaaaagggaatcatggaagaaatagtc
aactgtgatgcagacatcattagtcttcaggaagtggaaacggagcaatacttcaccctt
ttcctgccggccttgaaagaacggggatatgacggcttcttttctccaaagtcacgtgcc
aaaatcatgtcggagcaggagaaaaaacacgtggatggctgcgccatattcttcaaaacg
gaaaagttcactctggtgcagaagcacacggtggagttcaaccaggtggccatggccaac
tcggagggctcggaagccatgttgaacagagtgatgaccaaggacaacatcggggtcgcc
gtggtgttggaggtgcacaaggaattatttggagcaagtatgaaatcactccacgtggac
aagcagctgctcatcgtggccaatgcccacatgcactgggaccccgaatactcggacgtg
aaactcatccagaccatgatgttcgtctcagagctgaaaaacatcctggagaaagcctcg
agcaggcccagtagcccgacagcagatcccaactctatccctctggtgctgtgcgcggat
ctcaactcgctgcccgattcaggtgtcgtggaatacctgagcaacggcatagtagctgac
aaccacaaggacttcaaggagctgcgctacaacgagtgtctgatgaacttcagcggcaac
ggcaagaacggagcctcggagggccgcatcacgcacggcttccagctcaagagcgcctac
gagaacaacctgatgccttacaccaattacactttcgacttcaaaggtgtgattgactac
attttctactccaacactcacatgaacgtgctgggcgtgctgggccccttggaccctcag
tggctggtggacaacaacatcacgggctgcccgcacccgcacatcccctcggaccacttc
tcgctgctgacgcagctggagctgcagccgccgctgctgccgctggtgaacggcgtgcac
ctgccctcccgcagggtgacacagatcccaagagaacctggtgggaaccacttaatcctc
tctgccaagcatcagccaagaactcgcttcaattag
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