Ottowia testudinis: J1M35_01900
Help
Entry
J1M35_01900 CDS
T08188
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
otd
Ottowia testudinis
Pathway
otd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1M35_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otd03019
]
J1M35_01900
03400 DNA repair and recombination proteins [BR:
otd03400
]
J1M35_01900
Enzymes [BR:
otd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1M35_01900
Messenger RNA biogenesis [BR:
otd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J1M35_01900
DNA repair and recombination proteins [BR:
otd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J1M35_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Arm_4
Motif
Other DBs
NCBI-ProteinID:
QTD45702
UniProt:
A0A975CH62
LinkDB
All DBs
Position
complement(408093..410036)
Genome browser
AA seq
647 aa
AA seq
DB search
MTDSPGDILRSVFGYGAFRGQQQAVVEHVTAGGDALVLMPTGGGKSLCYQIPAIARQQQG
RGVTLVISPLIALMHDQVGALHEAGVSAAFLNSTLDWEQTQDIERQLLAGQLTLLYAAPE
RVGTPRFLGLLDTLHAHGNLSLFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPSVPRIAL
TATADAVTRADIVERLQLQQAEQFVSSFDRPNIRYSIVEKKDPTRQLLQFIEREHEGEAG
IVYCQSRKRVEELAQTLCEAGIDALPYHAGLPADERQRNQDRFLREDGVVMTATIAFGMG
IDKPDVRFVAHVDMPKNIEGYYQETGRAGRDGAPADAWMAYGLQDVVNQRRMIDESPAGD
DFKQVMVAKLDALLALAEATDCRRARLLGYFGEAMERESATDSIAATDDSTATRGSSGTY
SRWHCGNCDNCLHPPEVWDATDCARKLLSTIYRVQQMSGIGFGAGHIMDIVRGKATEKVA
QFGHDQLSTFGIGAEFTEPQLRGVLRQLIAIGALHVDAQAFNTLRLLPDARPILKGEQPV
RLRAATAPAPRERVRKTRAERHAPPPAAAALDAAGQARFAALKAWRGEVAREHNLPAYVI
FHDATLAAIAARAPQTLADLQGISGIGATKLERYGEEVLRVVAGAQP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgacagattcgcctggcgacattcttcgcagcgtgttcggctatggcgcctttcgcggc
cagcagcaggccgtggtcgagcacgtcaccgccggcggcgacgccctggtgctgatgccc
acgggcggcggcaagtcgctgtgctatcaaatccccgcgatcgcgcgccagcagcagggc
cgcggcgtgacgctggtgatctcgccgctgatcgcgctgatgcacgaccaggtgggcgcg
ctgcacgaagccggggtgtcggcggcgttcctcaattccacgctcgactgggagcagacg
caggacatcgagcgccagctgctggccggccagttgaccttgctgtacgccgcgcccgag
cgcgtgggcacgccgcgctttctgggcctgctcgatacgctgcacgcgcacggcaacctg
agcctgttcgccatcgacgaggcgcattgcgtcagccagtggggccacgactttcgcccc
gaataccgccagctgacggtgctgcacgagcgctggccgagcgtgccgcgcatcgccttg
accgccaccgccgacgcggtgacgcgcgccgacatcgtggaacggctgcaattgcagcag
gccgagcagttcgtcagcagctttgaccggccgaacatccgctacagcatcgtcgagaag
aaagacccgacgcgccaactgctgcagttcatcgagcgcgagcacgagggcgaggccggc
atcgtgtactgccagtcgcgcaagcgcgtggaagagctggcgcagacgctgtgcgaggcc
ggcatcgacgccctgccctaccacgccggcctgcccgccgacgagcggcagcgcaaccag
gaccgctttctgcgcgaagacggcgtggtgatgacggccaccatcgccttcggcatgggc
atcgacaagcccgacgtgcgctttgtcgcccacgtcgacatgcccaagaacatcgagggc
tattaccaggaaaccggccgcgccggccgcgacggcgcgccggccgacgcctggatggcc
tacggcctgcaggatgtggtcaaccagcgccgcatgattgacgaaagccccgcgggcgac
gacttcaagcaggtgatggtggccaagctggacgccctgctggccctggccgaggccacc
gactgccggcgcgcgcggctgctgggctacttcggcgaggcgatggaacgtgaaagcgct
actgattcaatagctgccaccgatgattccaccgcgactcgcggcagttcaggcacttat
tctcgctggcactgcggcaactgtgacaactgcctgcacccgcccgaggtatgggacgcc
accgactgcgcgcgcaaactgctgtccaccatctaccgcgtgcagcagatgagcggcatc
ggctttggcgccggacacatcatggacatcgtgcgtggcaaggcgaccgagaaggtggcg
cagttcgggcacgaccagctgtccaccttcggcatcggcgccgaattcaccgagccgcag
ctgcgcggcgtgctgcgccagctgatcgccatcggcgcgctgcacgtcgatgcgcaggcc
ttcaacacgctccggctgctgcccgacgcgcgccccatcctcaaaggcgagcagccagtg
cgcctgcgcgccgccaccgcgcccgccccgagagagcgcgtgcgcaagacgcgggctgag
cgccacgcgcccccgcccgccgccgccgcgctggacgccgccggacaggcgcgctttgcc
gccctgaaagcctggcgcggcgaagtggcgcgcgagcacaacctgcccgcctacgtgatc
tttcacgacgccaccctggcggcgattgccgcccgcgcgccgcagacgctggccgatctg
caaggcatcagcggcatcggcgccaccaagctggagcgttatggcgaggaggtgctgcgc
gtggtggcgggcgcgcagccctga
DBGET
integrated database retrieval system
