Ottowia testudinis: J1M35_06265
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Entry
J1M35_06265 CDS
T08188
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
otd
Ottowia testudinis
Pathway
otd03030
DNA replication
otd03430
Mismatch repair
otd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J1M35_06265 (dnaE)
03430 Mismatch repair
J1M35_06265 (dnaE)
03440 Homologous recombination
J1M35_06265 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otd03032
]
J1M35_06265 (dnaE)
03400 DNA repair and recombination proteins [BR:
otd03400
]
J1M35_06265 (dnaE)
Enzymes [BR:
otd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J1M35_06265 (dnaE)
DNA replication proteins [BR:
otd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J1M35_06265 (dnaE)
DNA repair and recombination proteins [BR:
otd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J1M35_06265 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QTD46483
UniProt:
A0A975CN08
LinkDB
All DBs
Position
1341543..1345043
Genome browser
AA seq
1166 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRVDEVVKAAARDRQPALAITDFGNLFGAIKFYKAARGAGVKP
LIGAEVLLEGRESEQEAPSRVLLLVVNQQGYLNLSELLARAWTQGVVKAQAVVRWAWLTE
LADGLILLSGAQAGPVGQALLQGQTQQASDVALQLAELFPHRFYLELQRAGRADDEAHVA
AAVQLAARLKLPVVATHPVQFATPDDYEAHEARVCIAEGEILGNPRRVRRFTPEQYFKSS
AEMTGLFADLPSAVANAAEIAQRCNLSLVLGKPQLPEFPVPEGHTIETYFRQASMDGLEE
RLHHLYPDAAKRDAERPRYLERLEFEIDTILKMGFPGYFLIVGDFINWAKANGCPVGPGR
GSGAGSLVAYALKITDLDPLEYQLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKAKY
GKNAVSQIATFGTMAARAAIRDVGRVLDMSYTFCDGISKLIPNKPGQHITIDGALKVEPL
LAERLAKEDEVKTLLALAQKLEGLTRNVGMHAGGVLIAPGKLTDFTPLYQQPGSESAVSQ
YDKDDVEAVGLVKFDFLGLATLTILEIAKDLIVQRHAGQADFAFENIALDDAKTYKLFQD
GRTEAVFQFESRGMQGMLRDARPTRLEDLIALNALYRPGPMDLIPSFVARKHGREPVEYP
HPLVAEMLSETYGIMVYQEQVMQTAQILGGYSLGGADLLRRAMGKKKPEEMAEHRLIFRE
GAAKNGISEHKADEIFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHYTAEFFCANMTV
EMDNTDKLKVLYEDALKEGMGFEPPDVNRGGYRFEPVSDKLIRYGLGAIKGTGQQAIEAI
VAAREGRGSGPAGGESGPFASLFDFCRRIDRTRVNKRTVEALIRAGAFDALQMNRAALAA
ALDLAFDFAAAAEANANQGGLFDLMDDGHGSSTQEPELPQITPWGVKERLSLEKTAIGFY
LSGHLFDEVEREVRQFVRRRLDELVDSREPQLLAGIVGDFRVINGQRGRLGLFKLDDKSR
SLDARVEESLIQQHRNLLKDDEFIVVMAKAMPDRFSGGLQLNVTQIWDLPAARCRFGKFL
RVAAGGGKAPDVRRLLAEYPPQVEHTEHGDLLRGLPVRLLIERRLDKGGVMAQVQLGDQA
QFFPSDAALASWMAQADDGRAAIVYE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcatttgcgtttgcataccgagttttcagtcgtcgacggcaccacgcgggtg
gatgaagttgtcaaggcggccgcgcgcgaccggcagccggcattggccatcaccgatttc
ggcaacctgttcggcgccatcaagttctacaaggccgcgcgcggcgcgggcgtcaagccg
ctgatcggcgccgaggtgctgctggaagggcgtgaatcggagcaggaggcgcccagccgc
gtgctgctgctggtggtgaaccagcagggctatctgaatttgtccgagctgctggcccgt
gcatggacacagggcgtggtcaaggcgcaggcggtggtgcgctgggcctggctgacggag
ttggctgacggcctgatccttttgtcgggcgcccaggcgggaccggtgggtcaggcgttg
ctgcaggggcagacccagcaggcgagcgatgtggcgctgcagctggccgagctgtttccg
caccgcttttacctggagctgcagcgtgccggccgtgccgacgacgaagcccatgtggcg
gccgccgtgcagctggccgcgcgcctgaagttgccggtggtggccacgcacccggtgcag
ttcgccacaccggacgactacgaggcgcatgaggcgcgcgtgtgcatcgccgagggcgag
atcctgggcaacccgcgccgcgtgcgccgcttcacgcccgagcagtatttcaagtcatcg
gccgagatgaccgggctgtttgccgacttgccttccgccgtggccaacgcggccgagatc
gcccagcgctgcaacctgagcctggtgctgggcaaaccgcaactgcccgagtttccggtg
cctgagggccacaccatcgagacctacttccgccaggcgtcgatggatggcctggaggag
cgcctgcatcacctttatcccgatgcggccaagcgtgacgccgagcgcccgcgttacctg
gagcggctggagttcgagatcgacaccatcctcaagatgggctttccaggctatttcctg
atcgtgggcgacttcatcaactgggccaaggccaatggctgccccgtggggccaggccgc
ggctcgggcgcgggatcgctggtggcgtatgcgctgaagatcaccgatctggatccgctg
gaatatcagctgctgttcgagcgctttctgaaccccgaacgcgtatcgatgcctgacttc
gacatcgacttctgccaggccaaccgcgaccgcgtgatcgactacgtgaaggccaagtac
ggcaagaacgcagtcagccagatcgccaccttcggcaccatggccgcgcgcgcggcgatc
cgcgacgtcggccgcgtgctcgacatgagctatacgttttgcgacggcatcagcaagctc
atccccaacaagccgggccagcacatcaccatcgacggcgcgctgaaagtggagccgctg
ctggccgagcgcctggccaaggaagacgaggtgaagacactgctggcgctggcgcaaaaa
ttggaagggctgacgcgcaacgtcggcatgcacgcgggcggcgtgctgattgcgcccggc
aagctgaccgatttcacgccgctttatcagcagcccggcagcgaatcggccgtgagccag
tacgacaaggacgacgtcgaggccgtgggcctggtcaagttcgactttctggggctggcg
acgctgacgattctggagatcgccaaggacttgatcgtccagcgccacgccggtcaggcc
gactttgcctttgagaacatcgcgctggacgacgccaagacctacaagctgttccaggac
ggccgcaccgaagccgtgttccagtttgaaagccgcggcatgcaaggtatgctgcgcgac
gccaggccgacgcggctggaagacctgatcgccctgaacgcgctgtaccgccccgggccg
atggacctgatccccagctttgtcgcccgcaagcacggacgcgagccggtcgagtacccg
cacccgctggtggccgagatgctgagcgagacctacggcatcatggtctatcaggagcag
gtgatgcagacggcgcagattctgggcggctacagcctgggcggcgccgacctgctgcgc
cgcgccatgggcaagaaaaagcccgaggagatggccgagcaccgcctgatcttccgcgag
ggcgcggccaagaacggcatcagcgaacacaaggccgacgaaatattcgacctgatggag
aagttcgctggctacggcttcaacaagtcgcacgccgccgcctactcgctgctggcctac
cacaccggctggctgaaggtgcactacacggccgagttcttctgcgccaacatgacggtg
gagatggacaacaccgacaagctgaaggtgctgtacgaagacgcgctgaaagagggcatg
ggcttcgagccgcccgacgtcaaccgcggcggctaccgcttcgagcccgtcagcgacaag
ctgatccgctacggcctgggcgccatcaagggcacggggcagcaggccatcgaggccatc
gtggctgcgcgcgaaggccggggcagcggtcctgcgggcggcgagagcgggccgttcgcc
agcctgttcgacttctgccgccgcatcgaccgcacgcgcgtcaacaagcgcaccgtcgag
gcgctgatccgcgccggcgccttcgatgcgctgcaaatgaaccgcgccgcgctggccgcc
gcgctcgatctggccttcgactttgccgccgccgccgaggccaacgccaaccagggcggc
ttgttcgatctgatggacgacggccacggctccagcacgcaagagcccgagttgccgcag
atcacgccctggggcgtgaaggagcgcctgtcgctggagaaaacggcgattggcttctac
ctgtcgggccatctgttcgacgaggtcgagcgcgaggtgcgccagttcgtgcgccgccgg
ctcgacgagctggtcgacagccgcgaaccgcaactgctggccggcatcgtgggcgacttt
cgcgttatcaacggacagcgcgggcgactggggctgttcaagctcgacgacaagtcgcgc
agcctcgacgcgcgcgtcgaggaaagcctgatccagcagcaccgcaacctgctgaaagat
gacgagttcatcgtcgtcatggccaaggccatgccggatcgcttctcgggcgggctgcag
ctcaacgtgacgcagatctgggacttgccggcggcgcgttgccgctttggcaagtttctg
cgcgtggccgctggcggtggcaaggcgccggatgtgcgccgcctgctggctgaatatccg
ccgcaggttgagcacaccgaacacggcgacctgctgcgcggcctgcccgtgcgcctgctc
atcgagcgcaggctcgacaagggcggcgtgatggcgcaggtgcagctgggtgatcaggcg
cagttcttccccagcgacgccgcgctggccagctggatggcgcaggcggacgacgggcgg
gcggccatcgtgtacgagtga
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